myRT

myRT report for GCA_002399655.1_ASM239965v1

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Seq: DHEB01000091.1 TPA_asm: Dysgonomonas sp. UBA4861 UBA4861_contig_3215, whole genome shotgun sequence (88310 bp)
Overview 1 RT 1: 85506-87945 bp Neighborhood of RT #1 [85506, 88307] HTH_17 RVT-GII YkfC Feature: gene Location: 85506-85817 bp Feature: domain Description: HTH_17 Location: 85632-85776 bp Feature: domain Description: HTH_1 7 Location: 85632-85776 bp Feature: gene Location: 85876-87162 bp Feature: gene Location: 87168-88307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87180-87642 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 871 80-87642 bp Feature: domain Description: YkfC Location: 87768-87945 bp Feature: domain Description: YkfC Location: 87768-87945 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_17 (pfam12728), RVT-GII, YkfC (COG3344)

Seq: DHEB01000250.1 TPA_asm: Dysgonomonas sp. UBA4861 UBA4861_contig_4377, whole genome shotgun sequence (21719 bp)
Overview 1 RT 1: 6611-11715 bp Neighborhood of RT #1 [6611, 11735] AbiEii AbiEii RVT-Retrons COG5483 Feature: gene Location: 6611-7306 bp Feature: domain Description: AbiEii Location: 6653-7085 bp Feature: domain Description: AbiEii Location: 6653-7085 bp Feature: domain Description: AbiEii Location: 7127-7259 bp Feature: domain Description: AbiEii Location: 712 7-72 59 bp Feature: gene Location: 7526-7795 bp Feature: gene Location: 8030-9763 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8180-8777 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8180-8777 bp Feature: gene Location: 9988-10833 bp Feature: gene Location: 10833-11735 bp Feature: domain Description: COG5483 Location: 11214-11715 bp Feature: domain Description: COG5483 Location: 112 14-11715 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5483 (Uncharacterized conserved protein, DUF488 family ), AbiEii (pfam08843), RVT-Retrons