myRT

myRT report for GCA_002401295.1_ASM240129v1

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Seq: NVSR01000027.1 SAR324 cluster bacterium isolate NORP136 Contig_source1382A_4474, whole genome shotgun sequence (24996 bp)
Overview 1 RT 1: 14427-20749 bp Neighborhood of RT #1 [14427, 21129] Arabinose_bd HTH_ARAC RVT-GII GIIM Fe-ADH-like PEGA Feature: gene Location: 14427-15443 bp Feature: domain Description: Arabinose_bd Location: 14490-15039 bp Feature: domain Description: Arabinose_bd Location: 1 4490-1 5039 bp Feature: domain Description: HTH_ARAC Location: 15186-15411 bp Feature: domain Description: HTH_ARAC Location: 1 51 86-1 541 1 bp Feature: gene Location: 15440-15985 bp Feature: gene Location: 16170-17748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16482-17142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6482-1 71 42 bp Feature: domain Description: GIIM Note: maturase Location: 17211-17430 bp Feature: domain Description: GIIM Note: maturase Location: 1 721 1 -1 7430 bp Feature: gene Location: 18468-19646 bp Feature: domain Description: Fe-ADH-like Location: 18504-19632 bp Feature: domain Description: Fe-ADH-like Location: 1 8504-1 9632 bp Feature: gene Location: 19966-21129 bp Feature: domain Description: PEGA Location: 20545-20749 bp Feature: domain Description: PEGA Location: 20545-20749 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arabinose_bd (pfam12625), HTH_ARAC (smart00342), RVT-GII, GIIM (pfam08388), Fe-ADH-like (cd17814), PEGA (pfam08308)

Seq: NVSR01000033.1 SAR324 cluster bacterium isolate NORP136 Contig_source1382A_4809, whole genome shotgun sequence (23515 bp)
Overview 1 RT 1: 317-7730 bp Neighborhood of RT #1 [317, 7771] PLDc_N_DEXD_b3 SSL2 S24_LexA-like DUF3427 DUF2971 RVT-GII GIIM HmoA Feature: gene Location: 317-3634 bp Feature: domain Description: PLDc_N_DEXD_b3 Location: 356-788 bp Feature: domain Description: PLDc_N_DEXD_b3 Location: 356-788 bp Feature: domain Description: SSL2 Location: 914-1964 bp Feature: domain Description: SSL2 Location: 914-1964 bp Feature: domain Description: S24_LexA-like Location: 2897-3146 bp Feature: domain Description: S2 4_LexA-like Location: 2 897-3146 bp Feature: domain Description: DUF3427 Location: 3188-3617 bp Feature: domain Description: DUF342 7 Location: 3188-3617 bp Feature: gene Location: 4221-5156 bp Feature: domain Description: DUF2971 Location: 4587-4794 bp Feature: domain Description: DUF2 971 Location: 4587-4794 bp Feature: gene Location: 5400-6656 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5604-6261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5604-62 61 bp Feature: domain Description: GIIM Note: maturase Location: 6345-6561 bp Feature: domain Description: GIIM Note: maturase Location: 6345-6561 bp Feature: gene Location: 7275-7472 bp Feature: gene Location: 7583-7771 bp Feature: domain Description: HmoA Location: 7586-7730 bp Feature: domain Description: HmoA Location: 7586-7730 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PLDc_N_DEXD_b3 (cd09205), SSL2 (COG1061), S24_LexA-like (cd06529), DUF3427 (pfam11907), DUF2971 (pfam11185), RVT-GII, GIIM (pfam08388), HmoA (COG2329)