myRT

myRT report for GCA_002401655.1_ASM240165v1

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Seq: NVTT01000013.1 Gammaproteobacteria bacterium isolate NORP108 Contig_source1382A_1846, whole genome shotgun sequence (48793 bp)
Overview 1 RT 1: 21731-27287 bp Neighborhood of RT #1 [21731, 27322] PRK09598 PRK09598 RVT-GII HTH_29 HTH_33 DDE_3 COG3547 Feature: gene Location: 21731-22045 bp Feature: domain Description: PRK09598 Location: 21737-22034 bp Feature: domain Description: PRK09598 Location: 21 737-22034 bp Feature: gene Location: 22039-22281 bp Feature: domain Description: PRK09598 Location: 22042-22261 bp Feature: domain Description: PRK09598 Location: 22042-22261 bp Feature: gene Location: 24178-25425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24355-25045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24355-25045 bp Feature: gene Location: 25438-26463 bp Feature: domain Description: HTH_29 Location: 25525-25669 bp Feature: domain Description: HTH_29 Location: 25525-25669 bp Feature: domain Description: HTH_33 Location: 25744-25897 bp Feature: domain Description: HTH_33 Location: 25744-25897 bp Feature: domain Description: DDE_3 Location: 25933-26362 bp Feature: domain Description: DDE_3 Location: 25933-26362 bp Feature: gene Location: 26666-27322 bp Feature: domain Description: COG3547 Location: 26690-27287 bp Feature: domain Description: COG3547 Location: 26690-27287 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09598 (phosphoethanolamine--lipid A transferase EptA), RVT-GII, HTH_29 (pfam13551), HTH_33 (pfam13592), DDE_3 (pfam13358), COG3547 (Transposase )