myRT

myRT report for GCA_002402105.1_ASM240210v1

Download annotations/find similar RTs

Seq: NVVD01000017.1 Candidatus Cloacimonetes bacterium isolate NORP72 Contig_source1382A_706, whole genome shotgun sequence (86158 bp)
Overview 1 RT 1: 1222-10438 bp Neighborhood of RT #1 [1222, 10438] HicA_toxin SLR SLR RVT-GII GIIM RVT-GII GIIM DD-carboxypeptidase_like Feature: gene Location: 1222-1476 bp Feature: domain Description: HicA_toxin Location: 1291-1447 bp Feature: domain Description: HicA_toxin Location: 1 291 -1 447 bp Feature: gene Location: 1838-2722 bp Feature: domain Description: SLR Location: 1901-2144 bp Feature: domain Description: SLR Location: 1 901 -21 44 bp Feature: domain Description: SLR Location: 2192-2534 bp Feature: domain Description: SLR Location: 21 92-2534 bp Feature: gene Location: 3029-4261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3233-3890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3233-3890 bp Feature: domain Description: GIIM Note: maturase Location: 3974-4178 bp Feature: domain Description: GIIM Note: maturase Location: 3974-41 78 bp Feature: gene Location: 5752-6984 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5956-6613 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5956-661 3 bp Feature: domain Description: GIIM Note: maturase Location: 6697-6901 bp Feature: domain Description: GIIM Note: maturase Location: 6697-6901 bp Feature: gene Location: 7737-8429 bp Feature: domain Description: DD-carboxypeptidase_like Location: 7821-8295 bp Feature: domain Description: DD-carboxypeptidase_like Location: 7821 -8295 bp Feature: gene Location: 10061-10438 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HicA_toxin (pfam07927), SLR (sd00010), RVT-GII, GIIM (pfam08388), DD-carboxypeptidase_like (cd14847)

Seq: NVVD01000009.1 Candidatus Cloacimonetes bacterium isolate NORP72 Contig_source1382A_183, whole genome shotgun sequence (170205 bp)
Overview 1 RT 1: 166248-170205 bp Neighborhood of RT #1 [166248, 170205] HTH_23 HTH_33 DDE_3 RVT-GII GIIM Feature: gene Location: 166248-166748 bp Feature: domain Description: HTH_23 Location: 166323-166449 bp Feature: domain Description: HTH_2 3 Location: 16632 3-166449 bp Feature: domain Description: HTH_33 Location: 166554-166722 bp Feature: domain Description: HTH_33 Location: 166554-16672 2 bp Feature: gene Location: 166733-167374 bp Feature: domain Description: DDE_3 Location: 166784-167183 bp Feature: domain Description: DDE_3 Location: 166784-167183 bp Feature: gene Location: 167468-168700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 167672-168329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 167672 -16832 9 bp Feature: domain Description: GIIM Note: maturase Location: 168410-168617 bp Feature: domain Description: GIIM Note: maturase Location: 168410-168617 bp Feature: gene Location: 169270-170205 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_23 (pfam13384), HTH_33 (pfam13592), DDE_3 (pfam13358), RVT-GII, GIIM (pfam08388)