myRT

myRT report for GCA_002402315.1_ASM240231v1

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Seq: DHFP01000058.1 TPA_asm: Clostridiales bacterium UBA4821 UBA4821_contig_101733, whole genome shotgun sequence (10003 bp)
Overview 1 RT 1: 4546-8316 bp Neighborhood of RT #1 [4546, 8316] Transposase_20 GIIM RVT-GII YraQ Feature: gene Location: 4546-5127 bp Feature: domain Description: Transposase_20 Location: 4822-5044 bp Feature: domain Description: Transposase_20 Location: 4822-5044 bp Feature: gene Location: 5741-6028 bp Feature: domain Description: GIIM Note: maturase Location: 5750-5939 bp Feature: domain Description: GIIM Note: maturase Location: 5750-5939 bp Feature: gene Location: 6221-6529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6242-6500 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6242-6500 bp Feature: gene Location: 6951-7907 bp Feature: domain Description: YraQ Location: 7026-7899 bp Feature: domain Description: YraQ Location: 7026-7899 bp Feature: gene Location: 8089-8316 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Transposase_20 (pfam02371), GIIM (pfam08388), RVT-GII, YraQ (COG0701)

Seq: DHFP01000099.1 TPA_asm: Clostridiales bacterium UBA4821 UBA4821_contig_35868, whole genome shotgun sequence (6222 bp)
Overview 1 RT 1: 1-3756 bp Neighborhood of RT #1 [1, 3761] RVT-GII GIIM COG1895 Feature: gene Location: 1-192 bp Feature: gene Location: 1026-2285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1239-1908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 39-1908 bp Feature: domain Description: GIIM Note: maturase Location: 1986-2199 bp Feature: domain Description: GIIM Note: maturase Location: 1986-2 199 bp Feature: gene Location: 2384-3088 bp Feature: gene Location: 3495-3761 bp Feature: domain Description: COG1895 Location: 3498-3756 bp Feature: domain Description: COG1895 Location: 3498-3756 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG1895 (Uncharacterized protein, contains HEPN domain, UPF0332 family )

Seq: DHFP01000004.1 TPA_asm: Clostridiales bacterium UBA4821 UBA4821_contig_81998, whole genome shotgun sequence (4028 bp)
Overview 1 RT 1: 2-3756 bp Neighborhood of RT #1 [2, 3800] RVT-GII Intron_maturas2 HNHc ExeA Feature: gene Location: 2-127 bp Feature: gene Location: 362-2200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 644-1478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 644-1478 bp Feature: domain Description: Intron_maturas2 Location: 1547-1907 bp Feature: domain Description: Intron_maturas2 Location: 1547-1907 bp Feature: domain Description: HNHc Note: nucleases Location: 2021-2174 bp Feature: domain Description: HNHc Note: nucleases Location: 2021-2174 bp Feature: gene Location: 2248-2394 bp Feature: gene Location: 2958-3800 bp Feature: domain Description: ExeA Location: 2994-3756 bp Feature: domain Description: ExeA Location: 2994-3 756 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ExeA (COG3267), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: DHFP01000082.1 TPA_asm: Clostridiales bacterium UBA4821 UBA4821_contig_86373, whole genome shotgun sequence (6008 bp)
Overview 1 RT 1: 623-3116 bp Neighborhood of RT #1 [623, 4423] Phage_XkdX RVT-DGRs DUF3751 Feature: gene Location: 623-754 bp Feature: gene Location: 795-962 bp Feature: domain Description: Phage_XkdX Location: 888-954 bp Feature: domain Description: Phage_XkdX Location: 888-954 bp Feature: gene Location: 1209-2285 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1413-2025 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 14 13-2025 bp Feature: gene Location: 2361-2546 bp Feature: gene Location: 2669-4423 bp Feature: domain Description: DUF3751 Location: 2687-3116 bp Feature: domain Description: DUF3751 Location: 2687-3116 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, DUF3751 (pfam12571), Phage_XkdX (pfam09693)