myRT

myRT report for GCA_002404095.1_ASM240409v1

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Seq: DHJA01000167.1 TPA_asm: Planctomycetaceae bacterium UBA4732 UBA4732_contig_29192, whole genome shotgun sequence (21795 bp)
Overview 1 RT 1: 2-4850 bp Neighborhood of RT #1 [2, 4864] DUF3500 RVT-UG23 RVT-UG19 bacter_Pnkp glyco_like_mftF Feature: gene Location: 2-967 bp Feature: domain Description: DUF3500 Location: 71-914 bp Feature: domain Description: DUF3500 Location: 71 -91 4 bp Feature: gene Location: 1209-1694 bp Feature: RT Description: RVT-UG23 Note: UG23 RT Location: 1437-1599 bp Feature: RT Description: RVT-UG23 Note: UG23 RT Location: 1 437-1 599 bp Feature: gene Location: 1609-3291 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 1639-2053 bp Feature: RT Description: RVT-UG1 9 Note: UG1 9 RT Location: 1 639-2053 bp Feature: gene Location: 3497-3874 bp Feature: domain Description: bacter_Pnkp Location: 3539-3872 bp Feature: domain Description: bacter_Pnkp Location: 3539-3872 bp Feature: gene Location: 4193-4864 bp Feature: domain Description: glyco_like_mftF Location: 4202-4850 bp Feature: domain Description: glyco_like_mftF Location: 4202-4850 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3500 (pfam12006), RVT-UG23, RVT-UG19, bacter_Pnkp (TIGR04075), glyco_like_mftF (TIGR04283)

Seq: DHJA01000210.1 TPA_asm: Planctomycetaceae bacterium UBA4732 UBA4732_contig_6435, whole genome shotgun sequence (13481 bp)
Overview 1 RT 1: 264-3823 bp Neighborhood of RT #1 [264, 3823] RVT-GII GIIM M28_like Feature: gene Location: 264-452 bp Feature: gene Location: 566-1528 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 860-1148 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 860-1148 bp Feature: domain Description: GIIM Note: maturase Location: 1217-1421 bp Feature: domain Description: GIIM Note: maturase Location: 12 17-142 1 bp Feature: gene Location: 1690-2595 bp Feature: domain Description: M28_like Location: 1816-2578 bp Feature: domain Description: M2 8_like Location: 1816-2 578 bp Feature: gene Location: 2708-3823 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), M28_like (cd08656)