myRT

myRT report for GCA_002405855.1_ASM240585v1

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Seq: DHMP01000176.1 TPA_asm: Bacteroidales bacterium UBA4639 UBA4639_contig_10883, whole genome shotgun sequence (11370 bp)
Overview 1 RT 1: 196-4909 bp Neighborhood of RT #1 [196, 4929] Cas2_I_II_III RVT-CRISPR Cas1_I-II-III Cmr6_III-B Cmr4_III-B Cmr4_III-B Feature: gene Location: 196-426 bp Feature: gene Location: 488-778 bp Feature: domain Description: Cas2_I_II_III Location: 512-734 bp Feature: domain Description: Cas2_I_II_III Location: 51 2-734 bp Feature: gene Location: 784-3048 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 991-1600 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 991 -1 600 bp Feature: domain Description: Cas1_I-II-III Location: 2059-3007 bp Feature: domain Description: Cas1 _I-II-III Location: 2059-3007 bp Feature: gene Location: 3057-4217 bp Feature: domain Description: Cmr6_III-B Location: 3645-4197 bp Feature: domain Description: Cmr6_III-B Location: 3645-41 97 bp Feature: gene Location: 4225-4929 bp Feature: domain Description: Cmr4_III-B Location: 4240-4606 bp Feature: domain Description: Cmr4_III-B Location: 4240-4606 bp Feature: domain Description: Cmr4_III-B Location: 4678-4909 bp Feature: domain Description: Cmr4_III-B Location: 4678-4909 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), RVT-CRISPR, Cas1_I-II-III (cl00656), Cmr6_III-B (cd09661), Cmr4_III-B (cd09682)

Seq: DHMP01000133.1 TPA_asm: Bacteroidales bacterium UBA4639 UBA4639_contig_6430, whole genome shotgun sequence (10005 bp)
Overview 1 RT 1: 2167-5132 bp Neighborhood of RT #1 [2167, 5353] RVT-UG26 Peptidase_M50B Feature: gene Location: 2167-2307 bp Feature: gene Location: 2351-2881 bp Feature: gene Location: 2991-4322 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 3243-3858 bp Feature: RT Description: RVT-UG2 6 Note: UG2 6 RT Location: 32 43-3858 bp Feature: gene Location: 4557-4802 bp Feature: gene Location: 4883-5353 bp Feature: domain Description: Peptidase_M50B Location: 4892-5132 bp Feature: domain Description: Peptidase_M50B Location: 4892 -5132 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG26, Peptidase_M50B (pfam13398)