myRT

myRT report for GCA_002406035.1_ASM240603v1

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Seq: DHMY01000011.1 TPA_asm: Lachnospiraceae bacterium UBA4630 UBA4630_contig_3545, whole genome shotgun sequence (38405 bp)
Overview 1 RT 1: 26401-31374 bp Neighborhood of RT #1 [26401, 31379] infC RVT-UG26 SfcA YhcC Feature: gene Location: 26401-26961 bp Feature: domain Description: infC Location: 26458-26956 bp Feature: domain Description: infC Location: 26458-26956 bp Feature: gene Location: 27225-27656 bp Feature: gene Location: 27814-29112 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 28063-28678 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 28063-28678 bp Feature: gene Location: 29218-30372 bp Feature: domain Description: SfcA Location: 29227-30361 bp Feature: domain Description: SfcA Location: 29227-30361 bp Feature: gene Location: 30420-31379 bp Feature: domain Description: YhcC Location: 30444-31374 bp Feature: domain Description: YhcC Location: 30444-31 374 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT infC (TIGR00168), RVT-UG26, SfcA (COG0281), YhcC (COG1242)

Seq: DHMY01000026.1 TPA_asm: Lachnospiraceae bacterium UBA4630 UBA4630_contig_619, whole genome shotgun sequence (223900 bp)
Overview 1 RT 1: 4411-9085 bp Neighborhood of RT #1 [4411, 9085] Peptidase_C14 RVT-Retrons GATase1_DJ-1 GATase1_DJ-1 Feature: gene Location: 4411-5379 bp Feature: domain Description: Peptidase_C14 Location: 4417-4948 bp Feature: domain Description: Peptidase_C14 Location: 4417-4948 bp Feature: gene Location: 5539-6156 bp Feature: gene Location: 6567-7625 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6741-7299 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6741-72 99 bp Feature: gene Location: 7762-8685 bp Feature: domain Description: GATase1_DJ-1 Location: 7789-7948 bp Feature: domain Description: GATase1_DJ-1 Location: 7789-7948 bp Feature: domain Description: GATase1_DJ-1 Location: 8056-8188 bp Feature: domain Description: GATase1_DJ-1 Location: 8056-8188 bp Feature: gene Location: 8774-9085 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_C14 (pfam00656), RVT-Retrons, GATase1_DJ-1 (cd03135)