myRT

myRT report for GCA_002407365.1_ASM240736v1

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Seq: MJGD01000008.1 Escherichia coli strain NA259 contig008, whole genome shotgun sequence (162908 bp)
Overview 1 RT 1: 127663-133772 bp Neighborhood of RT #1 [127663, 133831] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase SfsB Feature: gene Location: 127663-128583 bp Ori: PCM34068.1 Feature: domain Description: AbiEii Location: 127705-128446 bp Feature: domain Description: AbiEii Location: 1 27705-1 28446 bp Feature: gene Location: 128570-129352 bp Ori: PCM34069.1 Feature: domain Description: AbiEi_3_N Location: 128582-128843 bp Feature: domain Description: AbiEi_3_N Location: 1 28582-1 28843 bp Feature: domain Description: AbiEi_3 Location: 128855-129311 bp Feature: domain Description: AbiEi_3 Location: 1 28855-1 2931 1 bp Feature: gene Location: 129668-132877 bp Ori: PCM34070.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 130196-130685 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 301 96-1 30685 bp Feature: domain Description: nitrilase Location: 132191-132788 bp Feature: domain Description: nitrilase Location: 1 321 91 -1 32788 bp Feature: gene Location: 133224-133694 bp Feature: gene Location: 133691-133831 bp Ori: PCM34072.1 Feature: domain Description: SfsB Location: 133700-133772 bp Feature: domain Description: SfsB Location: 1 33700-1 33772 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), SfsB (COG3423)

Seq: MJGD01000102.1 Escherichia coli strain NA259 contig102, whole genome shotgun sequence (2430 bp)
Overview 1 RT 1: 93-1725 bp Neighborhood of RT #1 [93, 1760] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 93-1760 bp Ori: PCM24116.1 Feature: domain Description: RVT_N Location: 141-378 bp Feature: domain Description: RVT_N Location: 141-378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 429-1071 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 9-1071 bp Feature: domain Description: GIIM Note: maturase Location: 1122-1356 bp Feature: domain Description: GIIM Note: maturase Location: 112 2 -1356 bp Feature: domain Description: HNHc Note: nucleases Location: 1566-1725 bp Feature: domain Description: HNHc Note: nucleases Location: 1566-172 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)