myRT

myRT report for GCA_002407775.1_ASM240777v1

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Seq: DHOP01000064.1 TPA_asm: Prevotella sp. UBA5387 UBA5387_contig_13513, whole genome shotgun sequence (38085 bp)
Overview 1 RT 1: 3000-7392 bp Neighborhood of RT #1 [3000, 7392] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-GII Intron_maturas2 HNHc Feature: gene Location: 3000-3158 bp Feature: gene Location: 3333-4496 bp Feature: domain Description: Arm-DNA-bind_5 Location: 3363-3615 bp Feature: domain Description: Arm-DNA-bind_5 Location: 3363-361 5 bp Feature: domain Description: Phage_int_SAM_5 Location: 3666-3960 bp Feature: domain Description: Phage_int_SAM_5 Location: 3666-3960 bp Feature: domain Description: INTN1_C_like Location: 4014-4479 bp Feature: domain Description: INTN1 _C_like Location: 401 4-4479 bp Feature: gene Location: 5044-6846 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5308-6130 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5308-61 30 bp Feature: domain Description: Intron_maturas2 Location: 6307-6511 bp Feature: domain Description: Intron_maturas2 Location: 6307-651 1 bp Feature: domain Description: HNHc Note: nucleases Location: 6664-6838 bp Feature: domain Description: HNHc Note: nucleases Location: 6664-6838 bp Feature: gene Location: 6993-7121 bp Feature: gene Location: 7177-7392 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)