myRT

myRT report for GCA_002408025.1_ASM240802v1

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Seq: DHQD01000015.1 TPA_asm: Lactobacillus acetotolerans isolate UBA5347 UBA5347_contig_1752, whole genome shotgun sequence (26312 bp)
Overview 1 RT 1: 13622-17068 bp Neighborhood of RT #1 [13622, 17088] RelB RVT-GII GIIM TIGR00268 Nudix_N Nudix_Hydrolase_14 Feature: gene Location: 13622-13801 bp Feature: gene Location: 13825-14085 bp Feature: domain Description: RelB Location: 13840-14068 bp Feature: domain Description: RelB Location: 1 3840-1 4068 bp Feature: gene Location: 14426-15742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14645-15263 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4645-1 5263 bp Feature: domain Description: GIIM Note: maturase Location: 15320-15530 bp Feature: domain Description: GIIM Note: maturase Location: 1 5320-1 5530 bp Feature: gene Location: 16368-16574 bp Feature: domain Description: TIGR00268 Location: 16371-16521 bp Feature: domain Description: TIGR00268 Location: 1 6371 -1 6521 bp Feature: gene Location: 16690-17088 bp Feature: domain Description: Nudix_N Location: 16705-16870 bp Feature: domain Description: Nudix_N Location: 1 6705-1 6870 bp Feature: domain Description: Nudix_Hydrolase_14 Location: 16897-17068 bp Feature: domain Description: Nudix_Hydrolase_1 4 Location: 1 6897-1 7068 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelB (pfam04221), RVT-GII, GIIM (pfam08388), TIGR00268 (TIGR00268 family protein), Nudix_N (pfam12535), Nudix_Hydrolase_14 (cd04672)