myRT

myRT report for GCA_002409445.1_ASM240944v1

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Seq: DHNJ01000111.1 TPA_asm: Armatimonadetes bacterium UBA5419 UBA5419_contig_18993, whole genome shotgun sequence (27100 bp)
Overview 1 RT 1: 10704-17180 bp Neighborhood of RT #1 [10704, 17180] RtcB RVT-Retrons PRK15076 Feature: gene Location: 10704-12143 bp Feature: domain Description: RtcB Location: 11031-12111 bp Feature: domain Description: RtcB Location: 1 1 031 -1 21 1 1 bp Feature: gene Location: 12150-13484 bp Feature: gene Location: 13920-14795 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 14025-14589 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 4025-1 4589 bp Feature: gene Location: 14854-16182 bp Feature: domain Description: PRK15076 Location: 14857-16165 bp Feature: domain Description: PRK1 5076 Location: 1 4857-1 61 65 bp Feature: gene Location: 16242-17180 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RtcB (pfam01139), RVT-Retrons, PRK15076 (alpha-galactosidase; Provisional)

Seq: DHNJ01000237.1 TPA_asm: Armatimonadetes bacterium UBA5419 UBA5419_contig_7466, whole genome shotgun sequence (20941 bp)
Overview 1 RT 1: 2516-7614 bp Neighborhood of RT #1 [2516, 7640] Cas1_I-II-III RVT-CRISPR Cas2_I_II_III VHL DPPIV_N Peptidase_S9 Feature: gene Location: 2516-3520 bp Feature: domain Description: Cas1_I-II-III Location: 2525-3485 bp Feature: domain Description: Cas1_I-II-III Location: 2 52 5-3485 bp Feature: gene Location: 3532-4644 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3742-4348 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3742 -4348 bp Feature: gene Location: 4700-5002 bp Feature: domain Description: Cas2_I_II_III Location: 4718-4943 bp Feature: domain Description: Cas2 _I_II_III Location: 4718-4943 bp Feature: gene Location: 5205-7640 bp Feature: domain Description: VHL Location: 5643-5805 bp Feature: domain Description: VHL Location: 5643-5805 bp Feature: domain Description: DPPIV_N Location: 5877-6780 bp Feature: domain Description: DPPIV_N Location: 5877-6780 bp Feature: domain Description: Peptidase_S9 Location: 7050-7614 bp Feature: domain Description: Peptidase_S9 Location: 7050-7614 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas1_I-II-III (cl00656), RVT-CRISPR, Cas2_I_II_III (cl11442), VHL (pfam01847), DPPIV_N (pfam00930), Peptidase_S9 (pfam00326)