myRT

myRT report for GCA_002410285.1_ASM241028v1

Download annotations/find similar RTs

Seq: DHRH01000037.1 TPA_asm: Lactobacillus acetotolerans isolate UBA5317 UBA5317_contig_2848, whole genome shotgun sequence (26960 bp)
Overview 1 RT 1: 13707-17153 bp Neighborhood of RT #1 [13707, 17173] RelB RVT-GII GIIM TIGR00268 Nudix_N Nudix_Hydrolase_14 Feature: gene Location: 13707-13886 bp Feature: gene Location: 13910-14170 bp Feature: domain Description: RelB Location: 13925-14153 bp Feature: domain Description: RelB Location: 1 3925-1 41 53 bp Feature: gene Location: 14511-15827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14730-15348 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4730-1 5348 bp Feature: domain Description: GIIM Note: maturase Location: 15405-15615 bp Feature: domain Description: GIIM Note: maturase Location: 1 5405-1 561 5 bp Feature: gene Location: 16453-16659 bp Feature: domain Description: TIGR00268 Location: 16456-16606 bp Feature: domain Description: TIGR00268 Location: 1 6456-1 6606 bp Feature: gene Location: 16775-17173 bp Feature: domain Description: Nudix_N Location: 16790-16955 bp Feature: domain Description: Nudix_N Location: 1 6790-1 6955 bp Feature: domain Description: Nudix_Hydrolase_14 Location: 16982-17153 bp Feature: domain Description: Nudix_Hydrolase_1 4 Location: 1 6982-1 71 53 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelB (pfam04221), RVT-GII, GIIM (pfam08388), TIGR00268 (TIGR00268 family protein), Nudix_N (pfam12535), Nudix_Hydrolase_14 (cd04672)