myRT

myRT report for GCA_002410825.1_ASM241082v1

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Seq: DHOS01000003.1 TPA_asm: Proteiniphilum sp. UBA5384 UBA5384_contig_11052, whole genome shotgun sequence (21021 bp)
Overview 1 RT 1: 10076-15098 bp Neighborhood of RT #1 [10076, 15640] COG5304 MobC RVT-GII GIIM LptF_LptG Feature: gene Location: 10076-10426 bp Feature: domain Description: COG5304 Location: 10106-10244 bp Feature: domain Description: COG5304 Location: 1 01 06-1 0244 bp Feature: domain Description: MobC Location: 10295-10415 bp Feature: domain Description: MobC Location: 1 0295-1 041 5 bp Feature: gene Location: 10614-10745 bp Feature: gene Location: 11145-12584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11481-12096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 481 -1 2096 bp Feature: domain Description: GIIM Note: maturase Location: 12156-12384 bp Feature: domain Description: GIIM Note: maturase Location: 1 21 56-1 2384 bp Feature: gene Location: 13010-13330 bp Feature: gene Location: 13556-15640 bp Feature: domain Description: LptF_LptG Location: 13718-15098 bp Feature: domain Description: LptF_LptG Location: 1 371 8-1 5098 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5304 (Predicted DNA binding protein, CopG/RHH family ), MobC (pfam05713), RVT-GII, GIIM (pfam08388), LptF_LptG

Seq: DHOS01000006.1 TPA_asm: Proteiniphilum sp. UBA5384 UBA5384_contig_232, whole genome shotgun sequence (112576 bp)
Overview 1 RT 1: 44-4289 bp Neighborhood of RT #1 [44, 4330] INTN1_C_like RVT-GII Intron_maturas2 HNHc RVT-GII TPR TPR LuxR_C_like Feature: gene Location: 44-415 bp Feature: domain Description: INTN1_C_like Location: 167-344 bp Feature: domain Description: INTN1_C_like Location: 167-344 bp Feature: gene Location: 405-1379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 453-645 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 453-645 bp Feature: domain Description: Intron_maturas2 Location: 789-1023 bp Feature: domain Description: Intron_maturas2 Location: 789-102 3 bp Feature: domain Description: HNHc Note: nucleases Location: 1203-1338 bp Feature: domain Description: HNHc Note: nucleases Location: 12 03-1338 bp Feature: gene Location: 1432-1872 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1753-1855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1753-1855 bp Feature: gene Location: 2685-2831 bp Feature: gene Location: 2840-4330 bp Feature: domain Description: TPR Location: 2966-3272 bp Feature: domain Description: TPR Location: 2 966-32 72 bp Feature: domain Description: TPR Location: 3458-3752 bp Feature: domain Description: TPR Location: 3458-3752 bp Feature: domain Description: LuxR_C_like Location: 4139-4289 bp Feature: domain Description: LuxR_C_like Location: 4139-42 89 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), INTN1_C_like (cd01185), TPR (smart00028), LuxR_C_like (cd06170)

Seq: DHOS01000041.1 TPA_asm: Proteiniphilum sp. UBA5384 UBA5384_contig_5094, whole genome shotgun sequence (78496 bp)
Overview 1 RT 1: 8304-11699 bp Neighborhood of RT #1 [8304, 11716] TyrA RVT-GII RVT-GII cyclophilin Feature: gene Location: 8304-9077 bp Feature: domain Description: TyrA Location: 8307-9066 bp Feature: domain Description: TyrA Location: 83 07-9066 bp Feature: gene Location: 9239-9379 bp Feature: gene Location: 9666-10022 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9852-9960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9852-9960 bp Feature: gene Location: 9946-10494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9952-10204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9952-10204 bp Feature: gene Location: 10684-10815 bp Feature: gene Location: 10841-11716 bp Feature: domain Description: cyclophilin Location: 10991-11699 bp Feature: domain Description: cyclophilin Location: 10991-11699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TyrA (COG0287), RVT-GII, cyclophilin (PTZ00221)