myRT

myRT report for GCA_002411325.1_ASM241132v1

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Seq: DHSA01000047.1 TPA_asm: Syntrophomonas sp. UBA5298 UBA5298_contig_11542, whole genome shotgun sequence (18010 bp)
Overview 1 RT 1: 11552-17632 bp Neighborhood of RT #1 [11552, 17652] YwgA YdhJ RVT-UG7 YdcF-like AHBA_syn Feature: gene Location: 11552-12073 bp Feature: domain Description: YwgA Location: 11588-11849 bp Feature: domain Description: YwgA Location: 1 1 588-1 1 849 bp Feature: gene Location: 12093-13583 bp Feature: domain Description: YdhJ Location: 12120-13416 bp Feature: domain Description: YdhJ Location: 1 21 20-1 341 6 bp Feature: gene Location: 13854-15437 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 14274-14679 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1 4274-1 4679 bp Feature: gene Location: 15514-15837 bp Feature: domain Description: YdcF-like Location: 15538-15805 bp Feature: domain Description: YdcF-like Location: 1 5538-1 5805 bp Feature: gene Location: 16501-17652 bp Feature: domain Description: AHBA_syn Location: 16558-17632 bp Feature: domain Description: AHBA_syn Location: 1 6558-1 7632 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YwgA (COG3465), YdhJ (COG1078), RVT-UG7, YdcF-like (cl00630), AHBA_syn (cd00616)

Seq: DHSA01000073.1 TPA_asm: Syntrophomonas sp. UBA5298 UBA5298_contig_1874, whole genome shotgun sequence (176489 bp)
Overview 1 RT 1: 12864-17815 bp Neighborhood of RT #1 [12864, 17841] DUF4179 DUF5643 YkfC RVT-GII GIIM biotinyl_domain BirA2 Feature: gene Location: 12864-13988 bp Feature: domain Description: DUF4179 Location: 13101-13356 bp Feature: domain Description: DUF4179 Location: 13101-13356 bp Feature: domain Description: DUF5643 Location: 13653-13956 bp Feature: domain Description: DUF5643 Location: 13653-13956 bp Feature: gene Location: 14942-15196 bp Feature: domain Description: YkfC Location: 15071-15194 bp Feature: domain Description: YkfC Location: 15071-15194 bp Feature: gene Location: 15316-16359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15319-15913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15319-15913 bp Feature: domain Description: GIIM Note: maturase Location: 15970-16192 bp Feature: domain Description: GIIM Note: maturase Location: 15970-16192 bp Feature: gene Location: 16552-16764 bp Feature: domain Description: biotinyl_domain Location: 16567-16759 bp Feature: domain Description: biotinyl_domain Location: 16567-16759 bp Feature: gene Location: 16915-17841 bp Feature: domain Description: BirA2 Location: 17110-17815 bp Feature: domain Description: BirA2 Location: 17110-17815 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4179 (pfam13786), DUF5643 (pfam18705), YkfC (COG3344), RVT-GII, GIIM (pfam08388), biotinyl_domain (cd06850), BirA2 (COG0340)