myRT

myRT report for GCA_002411665.1_ASM241166v1

Download annotations/find similar RTs

Seq: NXHG01000039.1 Klebsiella quasipneumoniae strain 46 NODE_39_length_15906_cov_66.7182, whole genome shotgun sequence (15906 bp)
Overview 1 RT 1: 78-3130 bp Neighborhood of RT #1 [78, 3144] RVT-GII PRK10276 Feature: gene Location: 78-275 bp Feature: gene Location: 341-571 bp Feature: gene Location: 805-2313 bp Ori: PCM58398.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1207-1921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 207-1 921 bp Feature: gene Location: 2313-2564 bp Feature: gene Location: 2719-3144 bp Ori: PCM58400.1 Feature: domain Description: PRK10276 Location: 2722-3130 bp Feature: domain Description: PRK1 0276 Location: 2722-31 30 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: NXHG01000016.1 Klebsiella quasipneumoniae strain 46 NODE_16_length_119294_cov_73.4781, whole genome shotgun sequence (119294 bp)
Overview 1 RT 1: 26218-31406 bp Neighborhood of RT #1 [26218, 31406] SmpB PRK09692 RVT-UG7 Feature: gene Location: 26218-26700 bp Ori: PCM59414.1 Gene: smpB Feature: domain Description: SmpB Location: 26248-26692 bp Feature: domain Description: SmpB Location: 2 62 48-2 6692 bp Feature: gene Location: 27391-28590 bp Ori: PCM59415.1 Feature: domain Description: PRK09692 Location: 27394-28582 bp Feature: domain Description: PRK09692 Location: 2 7394-2 8582 bp Feature: gene Location: 28593-30221 bp Ori: PCM59416.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 29001-29430 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 2 9001-2 9430 bp Feature: gene Location: 30218-30955 bp Feature: gene Location: 31215-31406 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SmpB (pfam01668), PRK09692 (Integrase; provisional), RVT-UG7