myRT

myRT report for GCA_002411885.1_ASM241188v1

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Seq: NXHT01000023.1 Klebsiella pneumoniae strain 76 NODE_23_length_61933_cov_102.225, whole genome shotgun sequence (61933 bp)
Overview 1 RT 1: 1381-4877 bp Neighborhood of RT #1 [1381, 4877] InsE RVT-GII GIIM PHA02517 Feature: gene Location: 1381-2087 bp Feature: domain Description: InsE Location: 1405-1678 bp Feature: domain Description: InsE Location: 1 405-1 678 bp Feature: gene Location: 2038-2442 bp Feature: gene Location: 2736-4259 bp Ori: PCN32020.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3009-3741 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3009-3741 bp Feature: domain Description: GIIM Note: maturase Location: 3816-4014 bp Feature: domain Description: GIIM Note: maturase Location: 381 6-401 4 bp Feature: gene Location: 4328-4810 bp Feature: domain Description: PHA02517 Location: 4346-4784 bp Feature: domain Description: PHA0251 7 Location: 4346-4784 bp Feature: gene Location: 4776-4877 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: NXHT01000018.1 Klebsiella pneumoniae strain 76 NODE_18_length_78985_cov_78.4207, whole genome shotgun sequence (78985 bp)
Overview 1 RT 1: 9336-14648 bp Neighborhood of RT #1 [9336, 14812] PRK09692 RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 9336-10582 bp Feature: domain Description: PRK09692 Location: 9345-10239 bp Feature: domain Description: PRK09692 Location: 9345-102 39 bp Feature: gene Location: 10584-11225 bp Feature: gene Location: 11651-12616 bp Ori: PCN32373.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11759-12356 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11759-12 356 bp Feature: gene Location: 12594-14186 bp Ori: PCN32374.1 Feature: domain Description: COG3950 Location: 12774-13995 bp Feature: domain Description: COG3950 Location: 12 774-13995 bp Feature: gene Location: 14171-14812 bp Ori: PCN32375.1 Feature: domain Description: TIGR02646 Location: 14273-14648 bp Feature: domain Description: TIGR02 646 Location: 142 73-14648 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)

Seq: NXHT01000011.1 Klebsiella pneumoniae strain 76 NODE_11_length_151790_cov_104.109, whole genome shotgun sequence (151790 bp)
Overview 1 RT 1: 37833-41772 bp Neighborhood of RT #1 [37833, 41980] Psu RVT-UG17 SLATT_5 PRK09692 PRK09692 Feature: gene Location: 37833-38382 bp Feature: domain Description: Psu Location: 37851-38232 bp Feature: domain Description: Psu Location: 3 7851-3 823 2 bp Feature: gene Location: 38392-38527 bp Feature: gene Location: 38709-40118 bp Ori: PCN33092.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 38946-39558 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 3 8946-3 9558 bp Feature: gene Location: 40313-40954 bp Ori: PCN33191.1 Feature: domain Description: SLATT_5 Location: 40316-40919 bp Feature: domain Description: SLATT_5 Location: 403 16-40919 bp Feature: gene Location: 41007-41980 bp Feature: domain Description: PRK09692 Location: 41016-41379 bp Feature: domain Description: PRK09692 Location: 41016-413 79 bp Feature: domain Description: PRK09692 Location: 41400-41772 bp Feature: domain Description: PRK09692 Location: 41400-41772 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Psu (pfam07455), RVT-UG17, SLATT_5 (pfam18160), PRK09692 (Integrase; provisional)

Seq: NXHT01000052.1 Klebsiella pneumoniae strain 76 NODE_52_length_1894_cov_343.664, whole genome shotgun sequence (1894 bp)
Overview 1 RT 1: 1-1442 bp Neighborhood of RT #1 [1, 1834] RVT-GII Feature: gene Location: 1-217 bp Feature: gene Location: 350-1834 bp Ori: PCN31533.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-14 4 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII