myRT

myRT report for GCA_002412585.1_ASM241258v1

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Seq: DHVI01000095.1 TPA_asm: Sphaerochaeta sp. UBA5212 UBA5212_contig_37137, whole genome shotgun sequence (40091 bp)
Overview 1 RT 1: 13718-19461 bp Neighborhood of RT #1 [13718, 19526] PRK06354 RVT-GII GIIM COG2865 Feature: gene Location: 13718-14647 bp Feature: gene Location: 14741-16195 bp Feature: domain Description: PRK06354 Location: 14762-16181 bp Feature: domain Description: PRK06354 Location: 1 4762-1 61 81 bp Feature: gene Location: 16374-17792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16605-17220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6605-1 7220 bp Feature: domain Description: GIIM Note: maturase Location: 17289-17520 bp Feature: domain Description: GIIM Note: maturase Location: 1 7289-1 7520 bp Feature: gene Location: 18063-18371 bp Feature: gene Location: 18378-19526 bp Feature: domain Description: COG2865 Location: 18390-19461 bp Feature: domain Description: COG2865 Location: 1 8390-1 9461 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06354 (pyruvate kinase; Provisional), RVT-GII, GIIM (pfam08388), COG2865 (Predicted transcriptional regulator, contains HTH domain )

Seq: DHVI01000012.1 TPA_asm: Sphaerochaeta sp. UBA5212 UBA5212_contig_48648, whole genome shotgun sequence (5341 bp)
Overview 1 RT 1: 1976-5341 bp Neighborhood of RT #1 [1976, 5340] MFS_FucP_MFSD4_like Tas RVT-GII Feature: gene Location: 1976-3148 bp Feature: domain Description: MFS_FucP_MFSD4_like Location: 1997-3116 bp Feature: domain Description: MFS_FucP_MFSD4_like Location: 1997-3116 bp Feature: gene Location: 3326-4324 bp Feature: domain Description: Tas Location: 3344-4280 bp Feature: domain Description: Tas Location: 3344-42 80 bp Feature: gene Location: 4726-5340 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5197-5341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5197-5341 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_FucP_MFSD4_like (cd17333), Tas (COG0667), RVT-GII