myRT

myRT report for GCA_002412925.1_ASM241292v1

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Seq: DHVZ01000024.1 TPA_asm: Anaerolineales bacterium UBA5195 UBA5195_contig_1129, whole genome shotgun sequence (222257 bp)
Overview 1 RT 1: 98704-103992 bp Neighborhood of RT #1 [98704, 104552] Avd_like RVT-DGRs NACHT YfmG TIR_2 Feature: gene Location: 98704-99087 bp Feature: gene Location: 99175-99591 bp Feature: domain Description: Avd_like Location: 99196-99499 bp Feature: domain Description: Avd_like Location: 991 96-99499 bp Feature: gene Location: 99588-100733 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 99831-100476 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 99831 -1 00476 bp Feature: gene Location: 100847-103612 bp Feature: domain Description: NACHT Location: 101330-101762 bp Feature: domain Description: NACHT Location: 1 01 330-1 01 762 bp Feature: domain Description: YfmG Location: 102596-103598 bp Feature: domain Description: YfmG Location: 1 02596-1 03598 bp Feature: gene Location: 103629-104552 bp Feature: domain Description: TIR_2 Location: 103656-103992 bp Feature: domain Description: TIR_2 Location: 1 03656-1 03992 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NACHT (pfam05729), YfmG (COG1262), TIR_2 (pfam13676), Avd_like (cd16376), RVT-DGRs

Seq: DHVZ01000095.1 TPA_asm: Anaerolineales bacterium UBA5195 UBA5195_contig_1252, whole genome shotgun sequence (98520 bp)
Overview 1 RT 1: 13843-22165 bp Neighborhood of RT #1 [13843, 22185] Avd_like RVT-DGRs COG5635 pfam03781 COG5635 pfam03781 Feature: gene Location: 13843-14202 bp Feature: gene Location: 14365-14700 bp Feature: domain Description: Avd_like Location: 14386-14695 bp Feature: domain Description: Avd_like Location: 14386-14695 bp Feature: gene Location: 14697-15767 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 14904-15555 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 14904-15555 bp Feature: gene Location: 15896-18979 bp Feature: domain Description: COG5635 Location: 16571-17963 bp Feature: domain Description: COG5635 Location: 16571-17963 bp Feature: domain Description: pfam03781 Location: 18233-18959 bp Feature: domain Description: pfam03781 Location: 182 33-18959 bp Feature: gene Location: 19063-22185 bp Feature: domain Description: COG5635 Location: 19906-21106 bp Feature: domain Description: COG5635 Location: 19906-2 1106 bp Feature: domain Description: pfam03781 Location: 21442-22165 bp Feature: domain Description: pfam03781 Location: 2 1442 -2 2 165 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, COG5635 (Predicted NTPase, NACHT family domain ), pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1)

Seq: DHVZ01000076.1 TPA_asm: Anaerolineales bacterium UBA5195 UBA5195_contig_5357, whole genome shotgun sequence (111571 bp)
Overview 1 RT 1: 102836-110697 bp Neighborhood of RT #1 [102836, 110741] ParB DUF4032 DHDPS-like RVT-GII Intron_maturas2 HNHc PRK00024 RVT-GII GIIM HNHc PRK00024 excise Feature: gene Location: 102836-103708 bp Feature: domain Description: ParB Location: 103154-103322 bp Feature: domain Description: ParB Location: 103 154-103 3 22 bp Feature: domain Description: DUF4032 Location: 103424-103688 bp Feature: domain Description: DUF403 2 Location: 103 424-103 688 bp Feature: gene Location: 103718-104641 bp Feature: domain Description: DHDPS-like Location: 103748-104597 bp Feature: domain Description: DHDPS-like Location: 103 748-104597 bp Feature: gene Location: 104689-106602 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104953-105745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104953 -105745 bp Feature: domain Description: Intron_maturas2 Location: 105826-106108 bp Feature: domain Description: Intron_maturas2 Location: 105826-106108 bp Feature: domain Description: HNHc Note: nucleases Location: 106297-106462 bp Feature: domain Description: HNHc Note: nucleases Location: 106297-106462 bp Feature: gene Location: 107132-107308 bp Feature: domain Description: PRK00024 Location: 107165-107297 bp Feature: domain Description: PRK00024 Location: 107165-107297 bp Feature: gene Location: 107391-109097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 107673-108351 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 107673 -1083 51 bp Feature: domain Description: GIIM Note: maturase Location: 108423-108633 bp Feature: domain Description: GIIM Note: maturase Location: 108423 -10863 3 bp Feature: domain Description: HNHc Note: nucleases Location: 108936-109068 bp Feature: domain Description: HNHc Note: nucleases Location: 10893 6-109068 bp Feature: gene Location: 109652-110230 bp Feature: domain Description: PRK00024 Location: 109685-110219 bp Feature: domain Description: PRK00024 Location: 109685-110219 bp Feature: gene Location: 110466-110741 bp Feature: domain Description: excise Location: 110553-110697 bp Feature: domain Description: excise Location: 110553 -110697 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParB (smart00470), DUF4032 (pfam13224), DHDPS-like (cd00408), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK00024 (DNA repair protein RadC), GIIM (pfam08388), excise (TIGR01764)