myRT

myRT report for GCA_002413685.1_ASM241368v1

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Seq: DHXM01000327.1 TPA_asm: Mucilaginibacter sp. UBA5156 UBA5156_contig_15637, whole genome shotgun sequence (3371 bp)
Overview 1 RT 1: 3-2135 bp Neighborhood of RT #1 [3, 2135] RVT-Retrons Feature: gene Location: 3-470 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 30-198 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 30-1 98 bp Feature: gene Location: 574-1266 bp Feature: gene Location: 1662-2135 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: DHXM01000194.1 TPA_asm: Mucilaginibacter sp. UBA5156 UBA5156_contig_1790, whole genome shotgun sequence (28383 bp)
Overview 1 RT 1: 11581-15317 bp Neighborhood of RT #1 [11581, 15317] RVT-GII matK HNHc Feature: gene Location: 11581-12090 bp Feature: gene Location: 12135-12335 bp Feature: gene Location: 12621-14450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12906-13728 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 906-1372 8 bp Feature: domain Description: matK Location: 13902-14175 bp Feature: domain Description: matK Location: 13902 -14175 bp Feature: domain Description: HNHc Note: nucleases Location: 14280-14421 bp Feature: domain Description: HNHc Note: nucleases Location: 142 80-1442 1 bp Feature: gene Location: 14434-14937 bp Feature: gene Location: 15048-15317 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, matK (CHL00002), HNHc (smart00507)

Seq: DHXM01000267.1 TPA_asm: Mucilaginibacter sp. UBA5156 UBA5156_contig_21634, whole genome shotgun sequence (4479 bp)
Overview 1 RT 1: 33-1125 bp Neighborhood of RT #1 [33, 3332] group_II_RT_mat RVT-UG6 Feature: gene Location: 33-3332 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 75-387 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 75-3 87 bp Feature: RT Description: RVT-UG6 Note: UG6 RT Location: 687-1125 bp Feature: RT Description: RVT-UG6 Note: UG6 RT Location: 687-1125 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-UG6

Seq: DHXM01000026.1 TPA_asm: Mucilaginibacter sp. UBA5156 UBA5156_contig_47041, whole genome shotgun sequence (2549 bp)
Overview 1 RT 1: 1-2485 bp Neighborhood of RT #1 [1, 2532] RVT-Retrons Feature: gene Location: 1-1500 bp Feature: gene Location: 1642-2532 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1867-2485 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1867-24 85 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons