myRT

myRT report for GCA_002413725.1_ASM241372v1

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Seq: DHXO01000138.1 TPA_asm: Gallionella sp. UBA5154 UBA5154_contig_581, whole genome shotgun sequence (30758 bp)
Overview 1 RT 1: 6744-14900 bp Neighborhood of RT #1 [6744, 14917] PRK00024 COG4646 HepA RVT_N RVT-GII YkfC HNHc YtxK COG4646 COG4646 Feature: gene Location: 6744-7361 bp Feature: domain Description: PRK00024 Location: 6912-7359 bp Feature: domain Description: PRK00024 Location: 691 2-7359 bp Feature: gene Location: 7601-9847 bp Feature: domain Description: COG4646 Location: 7607-8597 bp Feature: domain Description: COG4646 Location: 7607-8597 bp Feature: domain Description: HepA Location: 8846-9149 bp Feature: domain Description: HepA Location: 8846-91 49 bp Feature: gene Location: 9967-11652 bp Feature: RT Description: RVT_N Location: 10036-10279 bp Feature: RT Description: RVT_N Location: 1 0036-1 0279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10324-10966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0324-1 0966 bp Feature: domain Description: YkfC Location: 11080-11356 bp Feature: domain Description: YkfC Location: 1 1 080-1 1 356 bp Feature: domain Description: HNHc Note: nucleases Location: 11479-11635 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 479-1 1 635 bp Feature: gene Location: 12064-12207 bp Feature: gene Location: 12233-14917 bp Feature: domain Description: YtxK Location: 12920-13265 bp Feature: domain Description: YtxK Location: 1 2920-1 3265 bp Feature: domain Description: COG4646 Location: 13370-13523 bp Feature: domain Description: COG4646 Location: 1 3370-1 3523 bp Feature: domain Description: COG4646 Location: 13664-14900 bp Feature: domain Description: COG4646 Location: 1 3664-1 4900 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00024 (DNA repair protein RadC), COG4646 (Adenine-specific DNA methylase, N12 class ), HepA (COG0553), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507)