myRT

myRT report for GCA_002413785.1_ASM241378v1

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Seq: DHXR01000044.1 TPA_asm: Mucilaginibacter sp. UBA5151 UBA5151_contig_1572, whole genome shotgun sequence (91298 bp)
Overview 1 RT 1: 75564-80928 bp Neighborhood of RT #1 [75564, 81749] INTN1_C_like RVT-GII GIIM DUF262 DUF1524 SMC_N Feature: gene Location: 75564-75824 bp Feature: domain Description: INTN1_C_like Location: 75591-75747 bp Feature: domain Description: INTN1 _C_like Location: 75591 -75747 bp Feature: gene Location: 76169-76321 bp Feature: gene Location: 76502-77770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76700-77318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76700-7731 8 bp Feature: domain Description: GIIM Note: maturase Location: 77372-77600 bp Feature: domain Description: GIIM Note: maturase Location: 77372-77600 bp Feature: gene Location: 77977-79830 bp Feature: domain Description: DUF262 Location: 78028-78679 bp Feature: domain Description: DUF262 Location: 78028-78679 bp Feature: domain Description: DUF1524 Location: 79423-79654 bp Feature: domain Description: DUF1 524 Location: 79423-79654 bp Feature: gene Location: 79902-81749 bp Feature: domain Description: SMC_N Location: 79914-80928 bp Feature: domain Description: SMC_N Location: 7991 4-80928 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INTN1_C_like (cd01185), RVT-GII, GIIM (pfam08388), DUF262 (pfam03235), DUF1524 (pfam07510), SMC_N (pfam02463)

Seq: DHXR01000061.1 TPA_asm: Mucilaginibacter sp. UBA5151 UBA5151_contig_2159, whole genome shotgun sequence (13096 bp)
Overview 1 RT 1: 6352-12256 bp Neighborhood of RT #1 [6352, 12256] AAA MarR TPR SLR SLR RVT_N RVT-GII GIIM McrA Feature: gene Location: 6352-6480 bp Feature: gene Location: 6619-9378 bp Feature: domain Description: AAA Location: 6736-7165 bp Feature: domain Description: AAA Location: 6736-7165 bp Feature: domain Description: MarR Location: 7447-7657 bp Feature: domain Description: MarR Location: 7447-7657 bp Feature: domain Description: TPR Location: 7999-8071 bp Feature: domain Description: TPR Location: 7999-8071 bp Feature: domain Description: SLR Location: 8131-8500 bp Feature: domain Description: SLR Location: 8131-8500 bp Feature: domain Description: SLR Location: 8533-8881 bp Feature: domain Description: SLR Location: 8533-8881 bp Feature: gene Location: 9770-11446 bp Feature: RT Description: RVT_N Location: 9803-10043 bp Feature: RT Description: RVT_N Location: 9803-10043 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10091-10736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10091-10736 bp Feature: domain Description: GIIM Note: maturase Location: 10853-11072 bp Feature: domain Description: GIIM Note: maturase Location: 10853-11072 bp Feature: domain Description: McrA Location: 11120-11423 bp Feature: domain Description: McrA Location: 1112 0-1142 3 bp Feature: gene Location: 11703-11951 bp Feature: gene Location: 12026-12256 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA (TIGR00769), MarR (pfam01047), TPR (smart00028), SLR (sd00010), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: DHXR01000056.1 TPA_asm: Mucilaginibacter sp. UBA5151 UBA5151_contig_4020, whole genome shotgun sequence (32706 bp)
Overview 1 RT 1: 3-4215 bp Neighborhood of RT #1 [3, 4215] RVT-GII GIIM RVT-GII GIIM Feature: gene Location: 3-143 bp Feature: gene Location: 148-1440 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 433-1069 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43 3 -1069 bp Feature: domain Description: GIIM Note: maturase Location: 1144-1363 bp Feature: domain Description: GIIM Note: maturase Location: 1144-13 63 bp Feature: gene Location: 1995-3242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2205-2865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2205-2865 bp Feature: domain Description: GIIM Note: maturase Location: 2967-3144 bp Feature: domain Description: GIIM Note: maturase Location: 2967-3 144 bp Feature: gene Location: 3541-3717 bp Feature: gene Location: 3799-4215 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: DHXR01000015.1 TPA_asm: Mucilaginibacter sp. UBA5151 UBA5151_contig_8199, whole genome shotgun sequence (3558 bp)
Overview 1 RT 1: 1-3550 bp Neighborhood of RT #1 [1, 3555] Rhs_assc_core RVT-GII Fib_succ_major PulF Feature: gene Location: 1-846 bp Feature: domain Description: Rhs_assc_core Location: 13-151 bp Feature: domain Description: Rhs_assc_core Location: 13-151 bp Feature: gene Location: 1000-1485 bp Feature: gene Location: 2048-2338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2258-2318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2258-2318 bp Feature: gene Location: 2543-3178 bp Feature: domain Description: Fib_succ_major Location: 2648-3173 bp Feature: domain Description: Fib_succ_major Location: 264 8-3173 bp Feature: gene Location: 3187-3555 bp Feature: domain Description: PulF Location: 3196-3550 bp Feature: domain Description: PulF Location: 3196-3550 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rhs_assc_core (TIGR03696), RVT-GII, Fib_succ_major (TIGR02145), PulF (COG1459)