myRT

myRT report for GCA_002414905.1_ASM241490v1

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Seq: DIAY01000115.1 TPA_asm: Holophagales bacterium UBA5066 UBA5066_contig_26418, whole genome shotgun sequence (13131 bp)
Overview 1 RT 1: 1489-9059 bp Neighborhood of RT #1 [1489, 9061] RVT-CRISPR Cas1_I-II-III Sortilin-Vps10 Sortilin-Vps10 Sortilin-Vps10 ProC Feature: gene Location: 1489-2145 bp Feature: gene Location: 2150-5485 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3350-3959 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3350-3959 bp Feature: domain Description: Cas1_I-II-III Location: 4490-5444 bp Feature: domain Description: Cas1 _I-II-III Location: 4490-5444 bp Feature: gene Location: 5532-8246 bp Feature: domain Description: Sortilin-Vps10 Location: 5913-6315 bp Feature: domain Description: Sortilin-Vps1 0 Location: 591 3-631 5 bp Feature: domain Description: Sortilin-Vps10 Location: 6450-6615 bp Feature: domain Description: Sortilin-Vps1 0 Location: 6450-661 5 bp Feature: domain Description: Sortilin-Vps10 Location: 7536-7782 bp Feature: domain Description: Sortilin-Vps1 0 Location: 7536-7782 bp Feature: gene Location: 8243-9061 bp Feature: domain Description: ProC Location: 8261-9059 bp Feature: domain Description: ProC Location: 8261 -9059 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-II-III (cl00656), Sortilin-Vps10 (pfam15902), ProC (COG0345)

Seq: DIAY01000118.1 TPA_asm: Holophagales bacterium UBA5066 UBA5066_contig_44630, whole genome shotgun sequence (4239 bp)
Overview 1 RT 1: 1582-4071 bp Neighborhood of RT #1 [1582, 4220] PRK07570 RVT-GII GIIM Feature: gene Location: 1582-2376 bp Feature: domain Description: PRK07570 Location: 1606-2341 bp Feature: domain Description: PRK07570 Location: 1606-2 341 bp Feature: gene Location: 2389-2679 bp Feature: gene Location: 2844-4220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3183-3795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3183-3795 bp Feature: domain Description: GIIM Note: maturase Location: 3858-4071 bp Feature: domain Description: GIIM Note: maturase Location: 3858-4071 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07570 (succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Validated), RVT-GII, GIIM (pfam08388)