myRT

myRT report for GCA_002415085.1_ASM241508v1

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Seq: DIBV01000006.1 TPA_asm: Arsukibacterium sp. UBA5043 UBA5043_contig_30, whole genome shotgun sequence (550733 bp)
Overview 1 RT 1: 507233-511944 bp Neighborhood of RT #1 [507233, 511944] AAA_15 AAA_15 TOPRIM_OLD RVT-Retrons COG4994 Feature: gene Location: 507233-508879 bp Feature: domain Description: AAA_15 Location: 507236-507374 bp Feature: domain Description: AAA_1 5 Location: 507236-507374 bp Feature: domain Description: AAA_15 Location: 507707-508238 bp Feature: domain Description: AAA_1 5 Location: 507707-508238 bp Feature: domain Description: TOPRIM_OLD Location: 508391-508634 bp Feature: domain Description: TOPRIM_OLD Location: 508391 -508634 bp Feature: gene Location: 509253-510230 bp Feature: gene Location: 510220-511152 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 510319-510904 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 51 031 9-51 0904 bp Feature: gene Location: 511335-511706 bp Feature: domain Description: COG4994 Location: 511347-511689 bp Feature: domain Description: COG4994 Location: 51 1 347-51 1 689 bp Feature: gene Location: 511726-511944 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), TOPRIM_OLD (cd01026), RVT-Retrons, COG4994 (Uncharacterized protein )

Seq: DIBV01000001.1 TPA_asm: Arsukibacterium sp. UBA5043 UBA5043_contig_55, whole genome shotgun sequence (462458 bp)
Overview 1 RT 1: 145742-151428 bp Neighborhood of RT #1 [145742, 151428] RMtype1_S_SonII-TRD2-CR2_like HsdS RMtype1_S_SonII-TRD2-CR2_like RVT-UG12 DUF1566 DUF1566 Feature: gene Location: 145742-147490 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 146063-146609 bp Feature: domain Description: RMtype1_S_SonII-TRD2 -CR2 _like Location: 146063-146609 bp Feature: domain Description: HsdS Location: 146645-146867 bp Feature: domain Description: HsdS Location: 146645-146867 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 146912-147470 bp Feature: domain Description: RMtype1_S_SonII-TRD2 -CR2 _like Location: 146912 -147470 bp Feature: gene Location: 147487-148182 bp Feature: gene Location: 148189-149778 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 148585-149005 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 148585-149005 bp Feature: gene Location: 149915-150817 bp Feature: domain Description: DUF1566 Location: 149930-150179 bp Feature: domain Description: DUF1566 Location: 149930-150179 bp Feature: domain Description: DUF1566 Location: 150257-150593 bp Feature: domain Description: DUF1566 Location: 1502 57-150593 bp Feature: gene Location: 151114-151428 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RMtype1_S_SonII-TRD2-CR2_like (cd17246), HsdS (COG0732), RVT-UG12, DUF1566 (pfam07603)