myRT

myRT report for GCA_002415975.1_ASM241597v1

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Seq: DIBF01000009.1 TPA_asm: Planctomycetaceae bacterium UBA5059 UBA5059_contig_2564, whole genome shotgun sequence (64128 bp)
Overview 1 RT 1: 45353-52880 bp Neighborhood of RT #1 [45353, 52885] PRK07561 RVT-Retrons S2P-M50_SpoIVFB MLE MR_MLE_C Feature: gene Location: 45353-48064 bp Feature: domain Description: PRK07561 Location: 45374-47996 bp Feature: domain Description: PRK07561 Location: 45374-47996 bp Feature: gene Location: 48079-48846 bp Feature: gene Location: 48993-50267 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 49425-50043 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 49425-50043 bp Feature: gene Location: 50813-51508 bp Feature: domain Description: S2P-M50_SpoIVFB Location: 50885-51494 bp Feature: domain Description: S2P-M50_SpoIVFB Location: 50885-51 494 bp Feature: gene Location: 51533-52885 bp Feature: domain Description: MLE Location: 51581-51734 bp Feature: domain Description: MLE Location: 51 581 -51 734 bp Feature: domain Description: MR_MLE_C Location: 52208-52880 bp Feature: domain Description: MR_MLE_C Location: 52208-52880 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07561 (DNA topoisomerase I subunit omega; Validated), RVT-Retrons, S2P-M50_SpoIVFB (cd06161), MLE (cd03318), MR_MLE_C (pfam13378)

Seq: DIBF01000033.1 TPA_asm: Planctomycetaceae bacterium UBA5059 UBA5059_contig_5236, whole genome shotgun sequence (46584 bp)
Overview 1 RT 1: 19302-22293 bp Neighborhood of RT #1 [19302, 22346] RVT-GII GIIM TnpB_IS66 Feature: gene Location: 19302-19454 bp Feature: gene Location: 19708-19917 bp Feature: gene Location: 19929-21326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20265-20886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 02 65-2 0886 bp Feature: domain Description: GIIM Note: maturase Location: 20934-21156 bp Feature: domain Description: GIIM Note: maturase Location: 2 0934-2 1156 bp Feature: gene Location: 21595-21984 bp Feature: gene Location: 21564-22346 bp Feature: domain Description: TnpB_IS66 Location: 22011-22293 bp Feature: domain Description: TnpB_IS66 Location: 2 2 011-2 2 2 93 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), TnpB_IS66 (pfam05717)

Seq: DIBF01000040.1 TPA_asm: Planctomycetaceae bacterium UBA5059 UBA5059_contig_5367, whole genome shotgun sequence (16876 bp)
Overview 1 RT 1: 5019-9702 bp Neighborhood of RT #1 [5019, 9702] RVT-CRISPR-like Feature: gene Location: 5019-5240 bp Feature: gene Location: 5353-5562 bp Feature: gene Location: 5805-8591 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 7638-8280 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 763 8-8280 bp Feature: gene Location: 8917-9285 bp Feature: gene Location: 9562-9702 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: DIBF01000021.1 TPA_asm: Planctomycetaceae bacterium UBA5059 UBA5059_contig_799, whole genome shotgun sequence (77245 bp)
Overview 1 RT 1: 1-7357 bp Neighborhood of RT #1 [1, 7389] RVT-CRISPR-like RNase_H_bacteria_like Peptidase_M56 MecR1 TolB TolB HEAT_2 Penicillinase_R Feature: gene Location: 1-1542 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 169-778 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 169-778 bp Feature: domain Description: RNase_H_bacteria_like Location: 1144-1537 bp Feature: domain Description: RNase_H_bacteria_like Location: 114 4 -1537 bp Feature: gene Location: 1614-6965 bp Feature: domain Description: Peptidase_M56 Location: 1677-1932 bp Feature: domain Description: Peptidase_M56 Location: 1677-1932 bp Feature: domain Description: MecR1 Location: 2106-2919 bp Feature: domain Description: MecR1 Location: 2106-2919 bp Feature: domain Description: TolB Location: 3084-3420 bp Feature: domain Description: TolB Location: 3084 -34 20 bp Feature: domain Description: TolB Location: 3567-3729 bp Feature: domain Description: TolB Location: 3567-3729 bp Feature: domain Description: HEAT_2 Location: 6660-6882 bp Feature: domain Description: HEAT_2 Location: 6660-6882 bp Feature: gene Location: 6991-7389 bp Feature: domain Description: Penicillinase_R Location: 7018-7357 bp Feature: domain Description: Penicillinase_R Location: 7018-7357 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, RNase_H_bacteria_like (cd13935), Peptidase_M56 (pfam05569), MecR1 (COG4219), TolB (COG0823), HEAT_2 (pfam13646), Penicillinase_R (pfam03965)