myRT

myRT report for GCA_002417105.1_ASM241710v1

Download annotations/find similar RTs

Seq: NXJU01000005.1 Klebsiella pneumoniae strain ST-1552:K117 NODE_5_length_325527_cov_162.299, whole genome shotgun sequence (325527 bp)
Overview 1 RT 1: 31755-38608 bp Neighborhood of RT #1 [31755, 38625] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 31755-32420 bp Feature: domain Description: INT_P4_C Location: 31860-32418 bp Feature: domain Description: INT_P4_C Location: 31 860-3241 8 bp Feature: gene Location: 32681-33121 bp Feature: domain Description: Integrase_1 Location: 32687-32903 bp Feature: domain Description: Integrase_1 Location: 32687-32903 bp Feature: gene Location: 33178-35256 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33586-34030 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33586-34030 bp Feature: gene Location: 35256-37865 bp Feature: domain Description: FimD Location: 35313-37854 bp Feature: domain Description: FimD Location: 3531 3-37854 bp Feature: gene Location: 37897-38625 bp Feature: domain Description: FimC Location: 37930-38608 bp Feature: domain Description: FimC Location: 37930-38608 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: NXJU01000084.1 Klebsiella pneumoniae strain ST-1552:K117 NODE_84_length_1915_cov_769.802, whole genome shotgun sequence (1915 bp)
Overview 1 RT 1: 60-1913 bp Neighborhood of RT #1 [60, 1913] RVT-GII Feature: gene Location: 60-1547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 465-1155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 465-1155 bp Feature: gene Location: 1701-1913 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII