myRT

myRT report for GCA_002417145.1_ASM241714v1

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Seq: NXJV01000036.1 Klebsiella pneumoniae strain ST-1414:K141 NODE_36_length_42091_cov_156.072, whole genome shotgun sequence (42091 bp)
Overview 1 RT 1: 2641-14737 bp Neighborhood of RT #1 [2641, 14742] DUF2791 Lhr RVT-UG12 DEXXQc_Upf1-like DEXXQc_Upf1-like SF1_C_Upf1 PRK09692 Feature: gene Location: 2641-3957 bp Feature: domain Description: DUF2791 Location: 2659-3862 bp Feature: domain Description: DUF2791 Location: 2659-3862 bp Feature: gene Location: 3954-6152 bp Feature: domain Description: Lhr Location: 3960-5700 bp Feature: domain Description: Lhr Location: 3960-5700 bp Feature: gene Location: 6826-8418 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 7210-7642 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 721 0-7642 bp Feature: gene Location: 9739-13362 bp Feature: domain Description: DEXXQc_Upf1-like Location: 10969-11278 bp Feature: domain Description: DEXXQc_Upf1 -like Location: 1 0969-1 1 278 bp Feature: domain Description: DEXXQc_Upf1-like Location: 12439-12640 bp Feature: domain Description: DEXXQc_Upf1 -like Location: 1 2439-1 2640 bp Feature: domain Description: SF1_C_Upf1 Location: 12814-13309 bp Feature: domain Description: SF1 _C_Upf1 Location: 1 281 4-1 3309 bp Feature: gene Location: 13501-14742 bp Feature: domain Description: PRK09692 Location: 13504-14737 bp Feature: domain Description: PRK09692 Location: 1 3504-1 4737 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2791 (pfam10923), Lhr (COG1201), RVT-UG12, DEXXQc_Upf1-like (cd17934), SF1_C_Upf1 (cd18808), PRK09692 (Integrase; provisional)

Seq: NXJV01000090.1 Klebsiella pneumoniae strain ST-1414:K141 NODE_90_length_6869_cov_209.313, whole genome shotgun sequence (6869 bp)
Overview 1 RT 1: 3378-6754 bp Neighborhood of RT #1 [3378, 6754] INT_Cre_C RVT-GII Feature: gene Location: 3378-3695 bp Feature: gene Location: 3761-4897 bp Feature: domain Description: INT_Cre_C Location: 4184-4838 bp Feature: domain Description: INT_Cre_C Location: 4184-4838 bp Feature: gene Location: 4983-6470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5388-6078 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5388-6078 bp Feature: gene Location: 6521-6754 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Cre_C (cd00799), RVT-GII