myRT

myRT report for GCA_002417155.1_ASM241715v1

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Seq: NXJW01000157.1 Klebsiella pneumoniae strain ST-1552:K077 contig_160, whole genome shotgun sequence (863 bp)
Overview 1 RT 1: 3-627 bp Neighborhood of RT #1 [3, 860] RVT-UG3 Feature: gene Location: 3-860 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 159-627 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1 59-627 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG3

Seq: NXJW01000163.1 Klebsiella pneumoniae strain ST-1552:K077 contig_167, whole genome shotgun sequence (783 bp)
Overview 1 RT 1: 1-775 bp Neighborhood of RT #1 [1, 780] RVT-UG8 RVT-UG8 Feature: gene Location: 1-498 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 10-163 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 10-163 bp Feature: gene Location: 499-780 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 502-775 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 502 -775 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8

Seq: NXJW01000023.1 Klebsiella pneumoniae strain ST-1552:K077 contig_23, whole genome shotgun sequence (326487 bp)
Overview 1 RT 1: 32859-39712 bp Neighborhood of RT #1 [32859, 39729] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 32859-33524 bp Feature: domain Description: INT_P4_C Location: 32964-33522 bp Feature: domain Description: INT_P4_C Location: 3 2964-3 3 522 bp Feature: gene Location: 33785-34225 bp Feature: domain Description: Integrase_1 Location: 33791-34007 bp Feature: domain Description: Integrase_1 Location: 3 3 791-3 4007 bp Feature: gene Location: 34282-36360 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 34690-35134 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3 4690-3 513 4 bp Feature: gene Location: 36360-38969 bp Feature: domain Description: FimD Location: 36417-38958 bp Feature: domain Description: FimD Location: 3 6417-3 8958 bp Feature: gene Location: 39001-39729 bp Feature: domain Description: FimC Location: 39034-39712 bp Feature: domain Description: FimC Location: 3 903 4-3 9712 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: NXJW01000084.1 Klebsiella pneumoniae strain ST-1552:K077 contig_84, whole genome shotgun sequence (1915 bp)
Overview 1 RT 1: 3-1464 bp Neighborhood of RT #1 [3, 1856] RVT-GII Feature: gene Location: 3-215 bp Feature: gene Location: 369-1856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774 -14 64 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII