myRT

myRT report for GCA_002417305.1_ASM241730v1

Download annotations/find similar RTs

Seq: NXJM01000001.1 Klebsiella pneumoniae strain ST-1552:K061 NODE_1_length_358172_cov_135.548, whole genome shotgun sequence (358172 bp)
Overview 1 RT 1: 31754-38607 bp Neighborhood of RT #1 [31754, 38624] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 31754-32419 bp Feature: domain Description: INT_P4_C Location: 31859-32417 bp Feature: domain Description: INT_P4_C Location: 31 859-3241 7 bp Feature: gene Location: 32680-33120 bp Feature: domain Description: Integrase_1 Location: 32686-32902 bp Feature: domain Description: Integrase_1 Location: 32686-32902 bp Feature: gene Location: 33177-35255 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33585-34029 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33585-34029 bp Feature: gene Location: 35255-37864 bp Feature: domain Description: FimD Location: 35312-37853 bp Feature: domain Description: FimD Location: 3531 2-37853 bp Feature: gene Location: 37896-38624 bp Feature: domain Description: FimC Location: 37929-38607 bp Feature: domain Description: FimC Location: 37929-38607 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: NXJM01000096.1 Klebsiella pneumoniae strain ST-1552:K061 NODE_96_length_1914_cov_687.842, whole genome shotgun sequence (1914 bp)
Overview 1 RT 1: 59-1912 bp Neighborhood of RT #1 [59, 1912] RVT-GII Feature: gene Location: 59-1546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: gene Location: 1700-1912 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII