myRT

myRT report for GCA_002417325.1_ASM241732v1

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Seq: NXJP01000001.1 Klebsiella pneumoniae strain ST-1552:K086 NODE_1_length_358212_cov_198.881, whole genome shotgun sequence (358212 bp)
Overview 1 RT 1: 319547-326415 bp Neighborhood of RT #1 [319547, 326417] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 319547-320275 bp Feature: domain Description: FimC Location: 319580-320258 bp Feature: domain Description: FimC Location: 31 9580-320258 bp Feature: gene Location: 320307-322916 bp Feature: domain Description: FimD Location: 320364-322905 bp Feature: domain Description: FimD Location: 320364-322905 bp Feature: gene Location: 322916-324994 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 323324-323768 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 323324-323768 bp Feature: gene Location: 325051-325491 bp Feature: domain Description: Integrase_1 Location: 325057-325273 bp Feature: domain Description: Integrase_1 Location: 325057-325273 bp Feature: gene Location: 325752-326417 bp Feature: domain Description: INT_P4_C Location: 325857-326415 bp Feature: domain Description: INT_P4_C Location: 325857-32641 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: NXJP01000090.1 Klebsiella pneumoniae strain ST-1552:K086 NODE_90_length_1914_cov_1046.97, whole genome shotgun sequence (1914 bp)
Overview 1 RT 1: 59-1912 bp Neighborhood of RT #1 [59, 1912] RVT-GII Feature: gene Location: 59-1546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: gene Location: 1700-1912 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII