myRT

myRT report for GCA_002417385.1_ASM241738v1

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Seq: NXJY01000120.1 Klebsiella pneumoniae strain ST-234:K080 NODE_121_length_738_cov_2.09656, whole genome shotgun sequence (738 bp)
Overview 1 RT 1: 1-736 bp Neighborhood of RT #1 [1, 735] RVT-UG8 Feature: gene Location: 1-735 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 403-736 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 403-736 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8

Seq: NXJY01000124.1 Klebsiella pneumoniae strain ST-234:K080 NODE_125_length_723_cov_2.01678, whole genome shotgun sequence (723 bp)
Overview 1 RT 1: 3-555 bp Neighborhood of RT #1 [3, 722] RVT-UG3 Feature: gene Location: 3-722 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 87-555 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 87-555 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG3

Seq: NXJY01000003.1 Klebsiella pneumoniae strain ST-234:K080 NODE_3_length_359120_cov_60.5482, whole genome shotgun sequence (359120 bp)
Overview 1 RT 1: 32623-39476 bp Neighborhood of RT #1 [32623, 39493] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 32623-33288 bp Feature: domain Description: INT_P4_C Location: 32728-33286 bp Feature: domain Description: INT_P4_C Location: 3 2728-3 3 286 bp Feature: gene Location: 33549-33989 bp Feature: domain Description: Integrase_1 Location: 33555-33771 bp Feature: domain Description: Integrase_1 Location: 3 3 555-3 3 771 bp Feature: gene Location: 34046-36124 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 34454-34898 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3 4454-3 4898 bp Feature: gene Location: 36124-38733 bp Feature: domain Description: FimD Location: 36181-38722 bp Feature: domain Description: FimD Location: 3 6181-3 8722 bp Feature: gene Location: 38765-39493 bp Feature: domain Description: FimC Location: 38798-39476 bp Feature: domain Description: FimC Location: 3 8798-3 9476 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: NXJY01000079.1 Klebsiella pneumoniae strain ST-234:K080 NODE_80_length_1914_cov_361.295, whole genome shotgun sequence (1914 bp)
Overview 1 RT 1: 3-1464 bp Neighborhood of RT #1 [3, 1856] RVT-GII Feature: gene Location: 3-215 bp Feature: gene Location: 369-1856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774 -14 64 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII