myRT

myRT report for GCA_002417545.1_ASM241754v1

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Seq: NXKL01000018.1 Klebsiella pneumoniae strain ST-15:K104 NODE_18_length_115044_cov_169.537, whole genome shotgun sequence (115044 bp)
Overview 1 RT 1: 491-7542 bp Neighborhood of RT #1 [491, 7559] PRK09692 Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 491-1354 bp Feature: domain Description: PRK09692 Location: 515-1352 bp Feature: domain Description: PRK09692 Location: 51 5-1 352 bp Feature: gene Location: 1615-2055 bp Feature: domain Description: Integrase_1 Location: 1621-1837 bp Feature: domain Description: Integrase_1 Location: 1 621 -1 837 bp Feature: gene Location: 2112-4190 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2520-2964 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2520-2964 bp Feature: gene Location: 4190-6799 bp Feature: domain Description: FimD Location: 4247-6788 bp Feature: domain Description: FimD Location: 4247-6788 bp Feature: gene Location: 6831-7559 bp Feature: domain Description: FimC Location: 6879-7542 bp Feature: domain Description: FimC Location: 6879-7542 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: NXKL01000040.1 Klebsiella pneumoniae strain ST-15:K104 NODE_40_length_42658_cov_198.118, whole genome shotgun sequence (42658 bp)
Overview 1 RT 1: 39840-42632 bp Neighborhood of RT #1 [39840, 42655] RVT-GII YjcC Feature: gene Location: 39840-40097 bp Feature: gene Location: 40168-40308 bp Feature: gene Location: 40694-40876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40802-40868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40802 -40868 bp Feature: gene Location: 41408-41581 bp Feature: gene Location: 41651-42655 bp Feature: domain Description: YjcC Location: 41819-42632 bp Feature: domain Description: YjcC Location: 41819-42 632 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, YjcC (COG4943)

Seq: NXKL01000088.1 Klebsiella pneumoniae strain ST-15:K104 NODE_88_length_1895_cov_1045.08, whole genome shotgun sequence (1895 bp)
Overview 1 RT 1: 59-1894 bp Neighborhood of RT #1 [59, 1894] RVT-GII Feature: gene Location: 59-1546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: gene Location: 1700-1894 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII