myRT

myRT report for GCA_002418205.1_ASM241820v1

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Seq: DIDP01000082.1 TPA_asm: Anaerolineales bacterium UBA5797 UBA5797_contig_2007, whole genome shotgun sequence (58970 bp)
Overview 1 RT 1: 54203-58952 bp Neighborhood of RT #1 [54203, 58969] PRK00024 RVT-GII Intron_maturas2 HNHc RVT_N RVT-GII Feature: gene Location: 54203-54919 bp Feature: domain Description: PRK00024 Location: 54320-54908 bp Feature: domain Description: PRK00024 Location: 54320-54908 bp Feature: gene Location: 55198-55347 bp Feature: gene Location: 55450-57267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55714-56506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5571 4-56506 bp Feature: domain Description: Intron_maturas2 Location: 56632-56869 bp Feature: domain Description: Intron_maturas2 Location: 56632-56869 bp Feature: domain Description: HNHc Note: nucleases Location: 57046-57220 bp Feature: domain Description: HNHc Note: nucleases Location: 57046-57220 bp Feature: gene Location: 57393-57629 bp Feature: gene Location: 58217-58969 bp Feature: domain Description: RVT_N Location: 58271-58502 bp Feature: domain Description: RVT_N Location: 58271 -58502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58559-58952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58559-58952 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00024 (DNA repair protein RadC), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), RVT_N (pfam13655)

Seq: DIDP01000024.1 TPA_asm: Anaerolineales bacterium UBA5797 UBA5797_contig_454, whole genome shotgun sequence (36748 bp)
Overview 1 RT 1: 33743-36442 bp Neighborhood of RT #1 [33743, 36442] PRK05753 RVT-GII GIIM Feature: gene Location: 33743-34162 bp Feature: domain Description: PRK05753 Location: 33746-34157 bp Feature: domain Description: PRK05753 Location: 33746-34157 bp Feature: gene Location: 34227-34361 bp Feature: gene Location: 34561-35871 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34855-35479 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34855-35479 bp Feature: domain Description: GIIM Note: maturase Location: 35578-35779 bp Feature: domain Description: GIIM Note: maturase Location: 35578-35779 bp Feature: gene Location: 35837-36442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05753 (nucleoside diphosphate kinase regulator; Provisional), RVT-GII, GIIM (pfam08388)

Seq: DIDP01000038.1 TPA_asm: Anaerolineales bacterium UBA5797 UBA5797_contig_527, whole genome shotgun sequence (74915 bp)
Overview 1 RT 1: 3-2622 bp Neighborhood of RT #1 [3, 2627] RVT-GII GIIM RVT-GII Flp Flp Feature: gene Location: 3-146 bp Feature: gene Location: 285-944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 288-498 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 288-498 bp Feature: domain Description: GIIM Note: maturase Location: 555-756 bp Feature: domain Description: GIIM Note: maturase Location: 555-756 bp Feature: gene Location: 934-1716 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1282-1687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1282-1687 bp Feature: gene Location: 2150-2302 bp Feature: domain Description: Flp Location: 2171-2297 bp Feature: domain Description: Flp Location: 2171-2297 bp Feature: gene Location: 2478-2627 bp Feature: domain Description: Flp Location: 2496-2622 bp Feature: domain Description: Flp Location: 2496-2622 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Flp (COG3847)