myRT

myRT report for GCA_002419965.1_ASM241996v1

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Seq: DIHC01000031.1 TPA_asm: Pseudomonas sp. UBA5706 UBA5706_contig_51, whole genome shotgun sequence (164178 bp)
Overview 1 RT 1: 126916-133967 bp Neighborhood of RT #1 [126916, 134002] MobC RVT-UG8 RVT-UG3 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C TnpB_IS66 Feature: gene Location: 126916-127509 bp Feature: domain Description: MobC Location: 127324-127429 bp Feature: domain Description: MobC Location: 1 27324-1 27429 bp Feature: gene Location: 127575-128309 bp Feature: gene Location: 128520-130562 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 129138-129579 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 291 38-1 29579 bp Feature: gene Location: 130555-131901 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 131008-131482 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1 31 008-1 31 482 bp Feature: gene Location: 132113-133624 bp Feature: domain Description: LZ_Tnp_IS66 Location: 132200-132410 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 32200-1 3241 0 bp Feature: domain Description: zf-IS66 Location: 132440-132563 bp Feature: domain Description: zf-IS66 Location: 1 32440-1 32563 bp Feature: domain Description: DDE_Tnp_IS66 Location: 132608-133463 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 32608-1 33463 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 133484-133598 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 33484-1 33598 bp Feature: gene Location: 133643-134002 bp Feature: domain Description: TnpB_IS66 Location: 133673-133967 bp Feature: domain Description: TnpB_IS66 Location: 1 33673-1 33967 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MobC (pfam05713), RVT-UG8, RVT-UG3, LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), TnpB_IS66 (pfam05717)