myRT

myRT report for GCA_002421005.1_ASM242100v1

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Seq: DIJC01000003.1 TPA_asm: Enterobacteriaceae bacterium UBA5654 UBA5654_contig_24, whole genome shotgun sequence (137637 bp)
Overview 1 RT 1: 56135-63419 bp Neighborhood of RT #1 [56135, 63436] COG3516 T6SS_VasE RVT-UG5 nitrilase OafA Feature: gene Location: 56135-56632 bp Feature: domain Description: COG3516 Location: 56147-56618 bp Feature: domain Description: COG351 6 Location: 561 47-5661 8 bp Feature: gene Location: 56756-57892 bp Feature: domain Description: T6SS_VasE Location: 56810-57884 bp Feature: domain Description: T6SS_VasE Location: 5681 0-57884 bp Feature: gene Location: 58283-60097 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 58814-59303 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 5881 4-59303 bp Feature: gene Location: 60302-61498 bp Feature: domain Description: nitrilase Location: 60812-61409 bp Feature: domain Description: nitrilase Location: 6081 2-61 409 bp Feature: gene Location: 62303-63436 bp Feature: domain Description: OafA Location: 62411-63419 bp Feature: domain Description: OafA Location: 6241 1 -6341 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3516 (Predicted component of the type VI protein secretion system ), T6SS_VasE (pfam05936), RVT-UG5, nitrilase (cl11424), OafA (COG1835)

Seq: DIJC01000020.1 TPA_asm: Enterobacteriaceae bacterium UBA5654 UBA5654_contig_5, whole genome shotgun sequence (302139 bp)
Overview 1 RT 1: 26543-30565 bp Neighborhood of RT #1 [26543, 30565] PRK10328 RVT-Retrons Feature: gene Location: 26543-26782 bp Feature: domain Description: PRK10328 Location: 26582-26771 bp Feature: domain Description: PRK1032 8 Location: 2 6582 -2 6771 bp Feature: gene Location: 27529-28299 bp Feature: gene Location: 28335-29291 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 28437-29025 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 8437-2 902 5 bp Feature: gene Location: 29304-30275 bp Feature: gene Location: 30422-30565 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10328 (DNA-binding protein StpA), RVT-Retrons