myRT

myRT report for GCA_002421505.1_ASM242150v1

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Seq: DIKF01000087.1 TPA_asm: Firmicutes bacterium UBA5625 UBA5625_contig_144074, whole genome shotgun sequence (2535 bp)
Overview 1 RT 1: 957-2286 bp Neighborhood of RT #1 [957, 2510] YkoI sulfite_red_C RVT-GII Feature: gene Location: 957-1478 bp Feature: domain Description: YkoI Location: 1065-1392 bp Feature: domain Description: YkoI Location: 1 065-1 392 bp Feature: gene Location: 1612-1989 bp Feature: domain Description: sulfite_red_C Location: 1681-1837 bp Feature: domain Description: sulfite_red_C Location: 1 681 -1 837 bp Feature: gene Location: 2145-2510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2148-2286 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 48-2286 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YkoI (COG3212), sulfite_red_C (TIGR02912), RVT-GII

Seq: DIKF01000014.1 TPA_asm: Firmicutes bacterium UBA5625 UBA5625_contig_237604, whole genome shotgun sequence (6601 bp)
Overview 1 RT 1: 2224-5873 bp Neighborhood of RT #1 [2224, 6598] Cas_Cas1 RVT-CRISPR COG4951 Feature: gene Location: 2224-2355 bp Feature: gene Location: 2681-3670 bp Feature: domain Description: Cas_Cas1 Location: 2693-3542 bp Feature: domain Description: Cas_Cas1 Location: 2 693-3542 bp Feature: gene Location: 3698-6598 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3953-4559 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3953-4559 bp Feature: domain Description: COG4951 Location: 5234-5873 bp Feature: domain Description: COG4951 Location: 52 34-5873 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas_Cas1 (pfam01867), RVT-CRISPR, COG4951 (Uncharacterized protein )

Seq: DIKF01000090.1 TPA_asm: Firmicutes bacterium UBA5625 UBA5625_contig_28533, whole genome shotgun sequence (12691 bp)
Overview 1 RT 1: 9195-12621 bp Neighborhood of RT #1 [9195, 12621] MntR RVT-GII MFS_LmrB_MDR_like Feature: gene Location: 9195-9593 bp Feature: domain Description: MntR Location: 9225-9588 bp Feature: domain Description: MntR Location: 9225-9588 bp Feature: gene Location: 9597-9809 bp Feature: gene Location: 10007-10270 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10133-10235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1013 3 -1023 5 bp Feature: gene Location: 10877-12418 bp Feature: domain Description: MFS_LmrB_MDR_like Location: 10931-12362 bp Feature: domain Description: MFS_LmrB_MDR_like Location: 1093 1-123 62 bp Feature: gene Location: 12481-12621 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MntR (COG1321), RVT-GII, MFS_LmrB_MDR_like (cd17503)