myRT

myRT report for GCA_002421915.1_ASM242191v1

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Seq: DISA01000023.1 TPA_asm: Gallionellaceae bacterium UBA6222 UBA6222_contig_18631, whole genome shotgun sequence (30041 bp)
Overview 1 RT 1: 3781-7764 bp Neighborhood of RT #1 [3781, 7772] Ubl_ThiS RVT_N RVT-GII GIIM HNHc PRK11161 Feature: gene Location: 3781-3984 bp Feature: domain Description: Ubl_ThiS Location: 3796-3982 bp Feature: domain Description: Ubl_ThiS Location: 3796-3982 bp Feature: gene Location: 4425-4742 bp Feature: gene Location: 4932-6566 bp Feature: domain Description: RVT_N Location: 4986-5229 bp Feature: domain Description: RVT_N Location: 4986-5229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5274-5913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5274-591 3 bp Feature: domain Description: GIIM Note: maturase Location: 5964-6198 bp Feature: domain Description: GIIM Note: maturase Location: 5964-61 98 bp Feature: domain Description: HNHc Note: nucleases Location: 6384-6555 bp Feature: domain Description: HNHc Note: nucleases Location: 6384-6555 bp Feature: gene Location: 6692-6835 bp Feature: gene Location: 7008-7772 bp Feature: domain Description: PRK11161 Location: 7083-7764 bp Feature: domain Description: PRK1 1 1 61 Location: 7083-7764 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ubl_ThiS (cd00565), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK11161 (fumarate/nitrate reduction transcriptional regulator Fnr)

Seq: DISA01000057.1 TPA_asm: Gallionellaceae bacterium UBA6222 UBA6222_contig_2903, whole genome shotgun sequence (169402 bp)
Overview 1 RT 1: 85082-89875 bp Neighborhood of RT #1 [85082, 89875] NTase_sub_bind NT_KNTase_like RMtype1_S_FclI-TRD1-CR1_like RMtype1_S_FclI-TRD1-CR1_like RVT-UG15 DUF3800 Feature: gene Location: 85082-85504 bp Feature: domain Description: NTase_sub_bind Location: 85091-85484 bp Feature: domain Description: NTase_sub_bind Location: 85091-85484 bp Feature: gene Location: 85501-87129 bp Feature: domain Description: NT_KNTase_like Location: 85537-85789 bp Feature: domain Description: NT_KNTase_like Location: 85537-85789 bp Feature: domain Description: RMtype1_S_FclI-TRD1-CR1_like Location: 85900-86422 bp Feature: domain Description: RMtype1_S_FclI-TRD1-CR1_like Location: 85900-8642 2 bp Feature: domain Description: RMtype1_S_FclI-TRD1-CR1_like Location: 86560-87082 bp Feature: domain Description: RMtype1_S_FclI-TRD1-CR1_like Location: 86560-87082 bp Feature: gene Location: 87126-88625 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 87540-87942 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 87540-87942 bp Feature: gene Location: 88732-89490 bp Feature: domain Description: DUF3800 Location: 88741-89374 bp Feature: domain Description: DUF3800 Location: 88741-89374 bp Feature: gene Location: 89612-89875 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTase_sub_bind (pfam08780), NT_KNTase_like (cd05403), RMtype1_S_FclI-TRD1-CR1_like (cd17254), RVT-UG15, DUF3800 (pfam12686)