myRT

myRT report for GCA_002422315.1_ASM242231v1

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Seq: DIUJ01000058.1 TPA_asm: Bacteroidetes bacterium UBA6161 UBA6161_contig_107227, whole genome shotgun sequence (26302 bp)
Overview 1 RT 1: 15413-20492 bp Neighborhood of RT #1 [15413, 20527] DUF1643 RVT-UG28b VirE_N PriCT_2 RMtype1_S_SonII-TRD2-CR2_like RMtype1_S_SonII-TRD2-CR2_like Feature: gene Location: 15413-15898 bp Feature: domain Description: DUF1643 Location: 15497-15857 bp Feature: domain Description: DUF1 643 Location: 1 5497-1 5857 bp Feature: gene Location: 15936-16316 bp Feature: gene Location: 16300-18141 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 16801-17509 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 1 6801 -1 7509 bp Feature: gene Location: 18227-19339 bp Feature: domain Description: VirE_N Location: 18434-18803 bp Feature: domain Description: VirE_N Location: 1 8434-1 8803 bp Feature: domain Description: PriCT_2 Location: 18992-19217 bp Feature: domain Description: PriCT_2 Location: 1 8992-1 921 7 bp Feature: gene Location: 19340-20527 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 19415-19883 bp Feature: domain Description: RMtype1 _S_SonII-TRD2-CR2_like Location: 1 941 5-1 9883 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 19913-20492 bp Feature: domain Description: RMtype1 _S_SonII-TRD2-CR2_like Location: 1 991 3-20492 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1643 (pfam07799), RVT-UG28b, VirE_N (pfam08800), PriCT_2 (pfam08707), RMtype1_S_SonII-TRD2-CR2_like (cd17246)

Seq: DIUJ01000010.1 TPA_asm: Bacteroidetes bacterium UBA6161 UBA6161_contig_45831, whole genome shotgun sequence (11073 bp)
Overview 1 RT 1: 2-3771 bp Neighborhood of RT #1 [2, 3899] PTR2 RVT-AbiP2 AcyC Feature: gene Location: 2-361 bp Feature: domain Description: PTR2 Location: 14-362 bp Feature: domain Description: PTR2 Location: 14-362 bp Feature: gene Location: 669-842 bp Feature: gene Location: 1079-2617 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1532-1988 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1532 -1988 bp Feature: gene Location: 2652-3161 bp Feature: gene Location: 3162-3899 bp Feature: domain Description: AcyC Location: 3306-3771 bp Feature: domain Description: AcyC Location: 3306-3771 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PTR2 (pfam00854), RVT-AbiP2, AcyC (COG2114)

Seq: DIUJ01000070.1 TPA_asm: Bacteroidetes bacterium UBA6161 UBA6161_contig_99876, whole genome shotgun sequence (41037 bp)
Overview 1 RT 1: 16122-22593 bp Neighborhood of RT #1 [16122, 22610] COG4867 ChlI RVT-UG15 DUF4411 Feature: gene Location: 16122-17219 bp Feature: domain Description: COG4867 Location: 16314-17208 bp Feature: domain Description: COG4867 Location: 163 14-17208 bp Feature: gene Location: 17222-18709 bp Feature: domain Description: ChlI Location: 17288-18311 bp Feature: domain Description: ChlI Location: 17288-183 11 bp Feature: gene Location: 18830-20347 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 19250-19655 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 19250-19655 bp Feature: gene Location: 20524-21468 bp Feature: gene Location: 22104-22610 bp Feature: domain Description: DUF4411 Location: 22128-22593 bp Feature: domain Description: DUF4411 Location: 22128-22593 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4867 (Uncharacterized protein, contains von Willebrand factor type A (vWA) domain ), ChlI (pfam13541), RVT-UG15, DUF4411 (pfam14367)