myRT

myRT report for GCA_002422795.1_ASM242279v1

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Seq: DITJ01000007.1 TPA_asm: Alphaproteobacteria bacterium UBA6187 UBA6187_contig_186612, whole genome shotgun sequence (21977 bp)
Overview 1 RT 1: 6802-12990 bp Neighborhood of RT #1 [6802, 13022] RVT-GII GIIM DUF2339 Feature: gene Location: 6802-9090 bp Feature: gene Location: 9337-9516 bp Feature: gene Location: 9545-9826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9614-9809 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 961 4-9809 bp Feature: gene Location: 9920-10249 bp Feature: domain Description: GIIM Note: maturase Location: 9956-10178 bp Feature: domain Description: GIIM Note: maturase Location: 9956-1 01 78 bp Feature: gene Location: 10371-13022 bp Feature: domain Description: DUF2339 Location: 10740-12990 bp Feature: domain Description: DUF2339 Location: 1 0740-1 2990 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF2339 (pfam10101)

Seq: DITJ01000042.1 TPA_asm: Alphaproteobacteria bacterium UBA6187 UBA6187_contig_46975, whole genome shotgun sequence (36734 bp)
Overview 1 RT 1: 15063-20166 bp Neighborhood of RT #1 [15063, 20177] DarT Macro_Poa1p_like YwgA YmdB RVT-Retrons PRK10610 Feature: gene Location: 15063-15746 bp Feature: domain Description: DarT Location: 15099-15744 bp Feature: domain Description: DarT Location: 15099-15744 bp Feature: gene Location: 15748-16809 bp Feature: domain Description: Macro_Poa1p_like Location: 15766-16165 bp Feature: domain Description: Macro_Poa1p_like Location: 15766-16165 bp Feature: domain Description: YwgA Location: 16291-16474 bp Feature: domain Description: YwgA Location: 162 91-16474 bp Feature: domain Description: YmdB Location: 16501-16651 bp Feature: domain Description: YmdB Location: 16501-16651 bp Feature: gene Location: 16829-18676 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 16970-17618 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 16970-17618 bp Feature: gene Location: 19593-19736 bp Feature: gene Location: 19779-20177 bp Feature: domain Description: PRK10610 Location: 19797-20166 bp Feature: domain Description: PRK10610 Location: 19797-2 0166 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DarT, Macro_Poa1p_like, YwgA (COG3465), YmdB (pfam13277), RVT-Retrons, PRK10610 (chemotaxis protein CheY)

Seq: DITJ01000046.1 TPA_asm: Alphaproteobacteria bacterium UBA6187 UBA6187_contig_80096, whole genome shotgun sequence (43427 bp)
Overview 1 RT 1: 6357-11499 bp Neighborhood of RT #1 [6357, 11499] HTH_19 dnaG RVT-G2Lb RVT-UG6 ALP_N-acyl_transferase Feature: gene Location: 6357-6683 bp Feature: domain Description: HTH_19 Location: 6465-6663 bp Feature: domain Description: HTH_19 Location: 6465-6663 bp Feature: gene Location: 6762-7805 bp Feature: domain Description: dnaG Location: 6795-7788 bp Feature: domain Description: dnaG Location: 6795-7788 bp Feature: gene Location: 7802-8176 bp Feature: RT Description: RVT-G2Lb Note: G2Lb RT Location: 8063-8165 bp Feature: RT Description: RVT-G2Lb Note: G2Lb RT Location: 8063 -8165 bp Feature: gene Location: 8300-10234 bp Feature: RT Description: RVT-UG6 Note: UG6 RT Location: 8429-8864 bp Feature: RT Description: RVT-UG6 Note: UG6 RT Location: 8429-8864 bp Feature: gene Location: 10227-11129 bp Feature: domain Description: ALP_N-acyl_transferase Location: 10245-10578 bp Feature: domain Description: ALP_N-acyl_transferase Location: 10245-10578 bp Feature: gene Location: 11311-11499 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_19 (pfam12844), dnaG (TIGR01391), RVT-G2Lb, RVT-UG6, ALP_N-acyl_transferase (cd07571)