myRT

myRT report for GCA_002422995.1_ASM242299v1

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Seq: DIUK01000027.1 TPA_asm: Rhodocyclaceae bacterium UBA6160 UBA6160_contig_23868, whole genome shotgun sequence (10026 bp)
Overview 1 RT 1: 259-3968 bp Neighborhood of RT #1 [259, 3970] RVT_N RVT-GII GIIM HNHc PRK11712 Feature: gene Location: 259-1929 bp Feature: RT Description: RVT_N Location: 313-556 bp Feature: RT Description: RVT_N Location: 31 3-556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 601-1240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 601 -1 240 bp Feature: domain Description: GIIM Note: maturase Location: 1291-1525 bp Feature: domain Description: GIIM Note: maturase Location: 1 291 -1 525 bp Feature: domain Description: HNHc Note: nucleases Location: 1732-1882 bp Feature: domain Description: HNHc Note: nucleases Location: 1 732-1 882 bp Feature: gene Location: 2494-2745 bp Feature: gene Location: 2954-3970 bp Feature: domain Description: PRK11712 Location: 2987-3968 bp Feature: domain Description: PRK1 1 71 2 Location: 2987-3968 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK11712 (ribonuclease G; Provisional)

Seq: DIUK01000084.1 TPA_asm: Rhodocyclaceae bacterium UBA6160 UBA6160_contig_82099, whole genome shotgun sequence (12387 bp)
Overview 1 RT 1: 1-2469 bp Neighborhood of RT #1 [1, 2469] RVT-GII GIIM HTH_Tnp_1 HTH_Tnp_1 Feature: gene Location: 1-201 bp Feature: gene Location: 379-696 bp Feature: gene Location: 684-1619 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 726-1209 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72 6-12 09 bp Feature: domain Description: GIIM Note: maturase Location: 1257-1479 bp Feature: domain Description: GIIM Note: maturase Location: 12 57-1479 bp Feature: gene Location: 1811-2296 bp Feature: domain Description: HTH_Tnp_1 Location: 1823-1961 bp Feature: domain Description: HTH_Tnp_1 Location: 182 3-1961 bp Feature: domain Description: HTH_Tnp_1 Location: 1991-2204 bp Feature: domain Description: HTH_Tnp_1 Location: 1991-2 2 04 bp Feature: gene Location: 2305-2469 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), RVT-GII, GIIM (pfam08388)