myRT

myRT report for GCA_002423485.1_ASM242348v1

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Seq: DIWH01000056.1 TPA_asm: bacterium UBP9_UBA6111 isolate UBA6111 UBA6111_contig_13844, whole genome shotgun sequence (20664 bp)
Overview 1 RT 1: 11149-20479 bp Neighborhood of RT #1 [11149, 20661] AAA_21 COG1483 group_II_RT_mat RVT-UNC nitrilase HNHc Feature: gene Location: 11149-12225 bp Feature: domain Description: AAA_21 Location: 11221-12040 bp Feature: domain Description: AAA_21 Location: 1 1 221 -1 2040 bp Feature: gene Location: 12445-15285 bp Feature: domain Description: COG1483 Location: 12481-14617 bp Feature: domain Description: COG1 483 Location: 1 2481 -1 461 7 bp Feature: gene Location: 15282-19664 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 15414-15627 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 541 4-1 5627 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 16221-16476 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1 6221 -1 6476 bp Feature: domain Description: nitrilase Location: 19191-19515 bp Feature: domain Description: nitrilase Location: 1 91 91 -1 951 5 bp Feature: gene Location: 19786-20661 bp Feature: domain Description: HNHc Note: nucleases Location: 20314-20479 bp Feature: domain Description: HNHc Note: nucleases Location: 2031 4-20479 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_21 (pfam13304), COG1483 (Predicted ATPase, AAA+ superfamily ), group_II_RT_mat (TIGR04416), RVT-Retrons/RVT-GII/RVT-CRISPR(RVT-UNC), nitrilase (cl11424), HNHc (smart00507)