myRT

myRT report for GCA_002423975.1_ASM242397v1

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Seq: DIOP01000030.1 TPA_asm: Lactobacillus acetotolerans isolate UBA5511 UBA5511_contig_3152, whole genome shotgun sequence (56824 bp)
Overview 1 RT 1: 35669-39135 bp Neighborhood of RT #1 [35669, 39135] Nudix_N Nudix_Hydrolase_14 RVT-GII GIIM RelB Feature: gene Location: 35669-36067 bp Feature: domain Description: Nudix_N Location: 35684-35849 bp Feature: domain Description: Nudix_N Location: 35684-35849 bp Feature: domain Description: Nudix_Hydrolase_14 Location: 35876-36047 bp Feature: domain Description: Nudix_Hydrolase_1 4 Location: 35876-36047 bp Feature: gene Location: 36255-36389 bp Feature: gene Location: 37015-38331 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37234-37852 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37234-37852 bp Feature: domain Description: GIIM Note: maturase Location: 37909-38119 bp Feature: domain Description: GIIM Note: maturase Location: 37909-381 1 9 bp Feature: gene Location: 38672-38932 bp Feature: domain Description: RelB Location: 38687-38915 bp Feature: domain Description: RelB Location: 38687-3891 5 bp Feature: gene Location: 38956-39135 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nudix_N (pfam12535), Nudix_Hydrolase_14 (cd04672), RVT-GII, GIIM (pfam08388), RelB (pfam04221)

Seq: DIOP01000028.1 TPA_asm: Lactobacillus acetotolerans isolate UBA5511 UBA5511_contig_3920, whole genome shotgun sequence (8077 bp)
Overview 1 RT 1: 300-4402 bp Neighborhood of RT #1 [300, 4536] RVT-AbiK RpiR RpiR RarA Feature: gene Location: 300-2111 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 843-1233 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 843-12 33 bp Feature: gene Location: 3160-3843 bp Feature: domain Description: RpiR Location: 3193-3364 bp Feature: domain Description: RpiR Location: 3193-3364 bp Feature: domain Description: RpiR Location: 3460-3802 bp Feature: domain Description: RpiR Location: 3460-3802 bp Feature: gene Location: 3880-4536 bp Feature: domain Description: RarA Location: 3982-4402 bp Feature: domain Description: RarA Location: 3982 -4402 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiK, RpiR (COG1737), RarA (COG2256)