myRT

myRT report for GCA_002429195.1_ASM242919v1

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Seq: DIYW01000074.1 TPA_asm: Mucilaginibacter sp. UBA6044 UBA6044_contig_225, whole genome shotgun sequence (99941 bp)
Overview 1 RT 1: 79899-85263 bp Neighborhood of RT #1 [79899, 86084] INTN1_C_like RVT-GII GIIM DUF262 DUF1524 SMC_N Feature: gene Location: 79899-80159 bp Feature: domain Description: INTN1_C_like Location: 79926-80082 bp Feature: domain Description: INTN1 _C_like Location: 79926-80082 bp Feature: gene Location: 80504-80656 bp Feature: gene Location: 80837-82105 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81035-81653 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 035-81 653 bp Feature: domain Description: GIIM Note: maturase Location: 81707-81935 bp Feature: domain Description: GIIM Note: maturase Location: 81 707-81 935 bp Feature: gene Location: 82312-84165 bp Feature: domain Description: DUF262 Location: 82363-83014 bp Feature: domain Description: DUF262 Location: 82363-8301 4 bp Feature: domain Description: DUF1524 Location: 83758-83989 bp Feature: domain Description: DUF1 524 Location: 83758-83989 bp Feature: gene Location: 84237-86084 bp Feature: domain Description: SMC_N Location: 84249-85263 bp Feature: domain Description: SMC_N Location: 84249-85263 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INTN1_C_like (cd01185), RVT-GII, GIIM (pfam08388), DUF262 (pfam03235), DUF1524 (pfam07510), SMC_N (pfam02463)

Seq: DIYW01000085.1 TPA_asm: Mucilaginibacter sp. UBA6044 UBA6044_contig_3475, whole genome shotgun sequence (30744 bp)
Overview 1 RT 1: 33-2253 bp Neighborhood of RT #1 [33, 2253] RVT-GII GIIM Feature: gene Location: 33-1280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 243-903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 43-903 bp Feature: domain Description: GIIM Note: maturase Location: 1005-1182 bp Feature: domain Description: GIIM Note: maturase Location: 1005-1182 bp Feature: gene Location: 1579-1755 bp Feature: gene Location: 1837-2253 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: DIYW01000092.1 TPA_asm: Mucilaginibacter sp. UBA6044 UBA6044_contig_7267, whole genome shotgun sequence (3575 bp)
Overview 1 RT 1: 1-2878 bp Neighborhood of RT #1 [1, 3573] PulF Fib_succ_major RVT-GII Rhs_assc_core Feature: gene Location: 1-372 bp Feature: domain Description: PulF Location: 13-367 bp Feature: domain Description: PulF Location: 13 -3 67 bp Feature: gene Location: 381-1016 bp Feature: domain Description: Fib_succ_major Location: 486-1011 bp Feature: domain Description: Fib_succ_major Location: 486-1011 bp Feature: gene Location: 1221-1511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1431-1491 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 143 1-1491 bp Feature: gene Location: 2074-2559 bp Feature: gene Location: 2713-3573 bp Feature: domain Description: Rhs_assc_core Location: 2737-2878 bp Feature: domain Description: Rhs_assc_core Location: 273 7-2878 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PulF (COG1459), Rhs_assc_core (TIGR03696), Fib_succ_major (TIGR02145)

Seq: DIYW01000023.1 TPA_asm: Mucilaginibacter sp. UBA6044 UBA6044_contig_9774, whole genome shotgun sequence (12290 bp)
Overview 1 RT 1: 6207-12111 bp Neighborhood of RT #1 [6207, 12111] AAA MarR TPR SLR SLR RVT_N RVT-GII GIIM McrA Feature: gene Location: 6207-6335 bp Feature: gene Location: 6474-9233 bp Feature: domain Description: AAA Location: 6591-7020 bp Feature: domain Description: AAA Location: 6591-7020 bp Feature: domain Description: MarR Location: 7302-7512 bp Feature: domain Description: MarR Location: 7302-7512 bp Feature: domain Description: TPR Location: 7854-7926 bp Feature: domain Description: TPR Location: 7854 -7926 bp Feature: domain Description: SLR Location: 7986-8355 bp Feature: domain Description: SLR Location: 7986-8355 bp Feature: domain Description: SLR Location: 8388-8736 bp Feature: domain Description: SLR Location: 8388-8736 bp Feature: gene Location: 9625-11301 bp Feature: RT Description: RVT_N Location: 9658-9898 bp Feature: RT Description: RVT_N Location: 9658-9898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9946-10591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 994 6-10591 bp Feature: domain Description: GIIM Note: maturase Location: 10708-10927 bp Feature: domain Description: GIIM Note: maturase Location: 10708-10927 bp Feature: domain Description: McrA Location: 10975-11278 bp Feature: domain Description: McrA Location: 10975-11278 bp Feature: gene Location: 11558-11806 bp Feature: gene Location: 11881-12111 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA (TIGR00769), MarR (pfam01047), TPR (smart00028), SLR (sd00010), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)