myRT

myRT report for GCA_002429895.1_ASM242989v1

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Seq: DJBD01000005.1 TPA_asm: Pseudomonas stutzeri isolate UBA5985 UBA5985_contig_1259, whole genome shotgun sequence (30929 bp)
Overview 1 RT 1: 26289-30788 bp Neighborhood of RT #1 [26289, 30928] Prok-E2_A E1_enzyme_family Prok-JAB RVT-UG5 Feature: gene Location: 26289-28514 bp Feature: domain Description: Prok-E2_A Location: 26421-26814 bp Feature: domain Description: Prok-E2_A Location: 26421 -2681 4 bp Feature: domain Description: E1_enzyme_family Location: 27399-27729 bp Feature: domain Description: E1 _enzyme_family Location: 27399-27729 bp Feature: domain Description: Prok-JAB Location: 28131-28488 bp Feature: domain Description: Prok-JAB Location: 281 31 -28488 bp Feature: gene Location: 28601-29374 bp Feature: gene Location: 29753-30928 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 30290-30788 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 30290-30788 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Prok-E2_A (pfam14457), E1_enzyme_family (cl22428), Prok-JAB (pfam14464), RVT-UG5

Seq: DJBD01000063.1 TPA_asm: Pseudomonas stutzeri isolate UBA5985 UBA5985_contig_456, whole genome shotgun sequence (61459 bp)
Overview 1 RT 1: 18531-23018 bp Neighborhood of RT #1 [18531, 23018] GstA IS5 RVT-GII GIIM IS5 Feature: gene Location: 18531-19118 bp Feature: domain Description: GstA Location: 18534-19104 bp Feature: domain Description: GstA Location: 18534-19104 bp Feature: gene Location: 19256-19795 bp Feature: domain Description: IS5 Location: 19442-19772 bp Feature: domain Description: IS5 Location: 19442 -19772 bp Feature: gene Location: 20288-21556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20501-21158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 0501-2 1158 bp Feature: domain Description: GIIM Note: maturase Location: 21236-21458 bp Feature: domain Description: GIIM Note: maturase Location: 2 12 36-2 1458 bp Feature: gene Location: 21628-22086 bp Feature: domain Description: IS5 Location: 21631-22051 bp Feature: domain Description: IS5 Location: 2 1631-2 2 051 bp Feature: gene Location: 22812-23018 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GstA (COG0625), IS5 (COG3039), RVT-GII, GIIM (pfam08388)

Seq: DJBD01000113.1 TPA_asm: Pseudomonas stutzeri isolate UBA5985 UBA5985_contig_51, whole genome shotgun sequence (84786 bp)
Overview 1 RT 1: 3-3446 bp Neighborhood of RT #1 [3, 3496] RVT-GII GIIM IS5 YejF Feature: gene Location: 3-950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24-549 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24-549 bp Feature: domain Description: GIIM Note: maturase Location: 630-855 bp Feature: domain Description: GIIM Note: maturase Location: 63 0-855 bp Feature: gene Location: 860-1480 bp Feature: domain Description: IS5 Location: 1007-1454 bp Feature: domain Description: IS5 Location: 1007-1454 bp Feature: gene Location: 1880-3496 bp Feature: domain Description: YejF Location: 1886-3446 bp Feature: domain Description: YejF Location: 1886-3 446 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), IS5 (COG3039), YejF (COG4172)