myRT

myRT report for GCA_002430955.1_ASM243095v1

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Seq: DJDG01000059.1 TPA_asm: Kurthia sp. UBA5930 UBA5930_contig_221, whole genome shotgun sequence (92270 bp)
Overview 1 RT 1: 76687-87508 bp Neighborhood of RT #1 [76687, 87516] addB_Gpos addA_Gpos RVT-GII Intron_maturas2 HNHc addA_Gpos MhpD Feature: gene Location: 76687-80205 bp Feature: domain Description: addB_Gpos Location: 76690-80179 bp Feature: domain Description: addB_Gpos Location: 76690-801 79 bp Feature: gene Location: 80186-81532 bp Feature: domain Description: addA_Gpos Location: 80222-81521 bp Feature: domain Description: addA_Gpos Location: 80222-81 521 bp Feature: gene Location: 82086-83954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82410-83235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8241 0-83235 bp Feature: domain Description: Intron_maturas2 Location: 83313-83778 bp Feature: domain Description: Intron_maturas2 Location: 8331 3-83778 bp Feature: domain Description: HNHc Note: nucleases Location: 83781-83937 bp Feature: domain Description: HNHc Note: nucleases Location: 83781 -83937 bp Feature: gene Location: 84142-86406 bp Feature: domain Description: addA_Gpos Location: 84145-86398 bp Feature: domain Description: addA_Gpos Location: 841 45-86398 bp Feature: gene Location: 86617-87516 bp Feature: domain Description: MhpD Location: 86788-87508 bp Feature: domain Description: MhpD Location: 86788-87508 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT addB_Gpos (TIGR02773), addA_Gpos (TIGR02785), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), MhpD (COG3971)

Seq: DJDG01000001.1 TPA_asm: Kurthia sp. UBA5930 UBA5930_contig_46, whole genome shotgun sequence (76842 bp)
Overview 1 RT 1: 17569-25093 bp Neighborhood of RT #1 [17569, 25098] PcrB_like pcrA RVT-GII HNH pcrA ligA Feature: gene Location: 17569-18258 bp Feature: domain Description: PcrB_like Location: 17590-18235 bp Feature: domain Description: PcrB_like Location: 17590-182 35 bp Feature: gene Location: 18293-20143 bp Feature: domain Description: pcrA Location: 18317-20114 bp Feature: domain Description: pcrA Location: 18317-2 0114 bp Feature: gene Location: 20757-22535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21051-21801 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 1051-2 1801 bp Feature: domain Description: HNH Note: nucleases Location: 22329-22440 bp Feature: domain Description: HNH Note: nucleases Location: 2 2 32 9-2 2 440 bp Feature: gene Location: 22603-23079 bp Feature: domain Description: pcrA Location: 22639-23068 bp Feature: domain Description: pcrA Location: 2 2 639-2 3068 bp Feature: gene Location: 23092-25098 bp Feature: domain Description: ligA Location: 23107-25093 bp Feature: domain Description: ligA Location: 2 3107-2 5093 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PcrB_like (cd02812), pcrA (TIGR01073), RVT-GII, HNH (pfam01844), ligA (PRK14351)