myRT

myRT report for GCA_002431745.1_ASM243174v1

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Seq: DJDO01000034.1 TPA_asm: Streptococcus suis isolate UBA5922 UBA5922_contig_349, whole genome shotgun sequence (52634 bp)
Overview 1 RT 1: 30829-41026 bp Neighborhood of RT #1 [30829, 41064] pyr_form_ly_1 COG0610 RVT-AbiP2 RMtype1_S_TRD-CR_like RMtype1_S_TRD-CR_like Feature: gene Location: 30829-33174 bp Feature: domain Description: pyr_form_ly_1 Location: 30883-33133 bp Feature: domain Description: pyr_form_ly_1 Location: 30883-331 33 bp Feature: gene Location: 33662-36631 bp Feature: domain Description: COG0610 Location: 33686-36362 bp Feature: domain Description: COG061 0 Location: 33686-36362 bp Feature: gene Location: 37018-38775 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 37486-37933 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 37486-37933 bp Feature: gene Location: 38815-39618 bp Feature: gene Location: 39727-41064 bp Feature: domain Description: RMtype1_S_TRD-CR_like Location: 39850-40354 bp Feature: domain Description: RMtype1 _S_TRD-CR_like Location: 39850-40354 bp Feature: domain Description: RMtype1_S_TRD-CR_like Location: 40510-41026 bp Feature: domain Description: RMtype1 _S_TRD-CR_like Location: 4051 0-41 026 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pyr_form_ly_1 (TIGR01255), COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), RVT-AbiP2, RMtype1_S_TRD-CR_like (cl38903)

Seq: DJDO01000028.1 TPA_asm: Streptococcus suis isolate UBA5922 UBA5922_contig_88, whole genome shotgun sequence (101143 bp)
Overview 1 RT 1: 97391-100329 bp Neighborhood of RT #1 [97391, 100421] RVT-GII GIIM DUF2806 Feature: gene Location: 97391-97597 bp Feature: gene Location: 97723-97860 bp Feature: gene Location: 98026-99303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98230-98845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 982 30-98845 bp Feature: domain Description: GIIM Note: maturase Location: 98899-99112 bp Feature: domain Description: GIIM Note: maturase Location: 98899-99112 bp Feature: gene Location: 99414-100421 bp Feature: domain Description: DUF2806 Location: 99933-100329 bp Feature: domain Description: DUF2 806 Location: 99933-10032 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF2806 (pfam10987)