myRT

myRT report for GCA_002432925.1_ASM243292v1

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Seq: DJHC01000001.1 TPA_asm: Acinetobacter ursingii isolate UBA5830 UBA5830_contig_20, whole genome shotgun sequence (226739 bp)
Overview 1 RT 1: 178330-184216 bp 2 RT 2: 191920-197549 bp Neighborhood of RT #1 [178330, 184216] prfC COG3177 RVT-UG2 T5orf172 Neighborhood of RT #2 [191920, 197569] KAP_NTPase RVT_N RVT-GII GIIM COG5377 Feature: gene Location: 178330-179919 bp Feature: domain Description: prfC Location: 178345-179917 bp Feature: domain Description: prfC Location: 1 78345-1 7991 7 bp Feature: gene Location: 180102-181106 bp Feature: domain Description: COG3177 Location: 180108-180999 bp Feature: domain Description: COG31 77 Location: 1 801 08-1 80999 bp Feature: gene Location: 181222-182622 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 181459-182353 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 81 459-1 82353 bp Feature: gene Location: 183010-183924 bp Feature: domain Description: T5orf172 Location: 183535-183859 bp Feature: domain Description: T5orf1 72 Location: 1 83535-1 83859 bp Feature: gene Location: 183929-184216 bp Feature: gene Location: 191920-193713 bp Feature: domain Description: KAP_NTPase Location: 191962-193075 bp Feature: domain Description: KAP_NTPase Location: 1 91 962-1 93075 bp Feature: gene Location: 194016-194744 bp Feature: gene Location: 194935-196515 bp Feature: domain Description: RVT_N Location: 194992-195235 bp Feature: domain Description: RVT_N Location: 1 94992-1 95235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 195280-195931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 95280-1 95931 bp Feature: domain Description: GIIM Note: maturase Location: 195982-196216 bp Feature: domain Description: GIIM Note: maturase Location: 1 95982-1 9621 6 bp Feature: gene Location: 196838-197059 bp Feature: gene Location: 197108-197569 bp Feature: domain Description: COG5377 Location: 197192-197549 bp Feature: domain Description: COG5377 Location: 1 971 92-1 97549 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT prfC (TIGR00503), COG3177 (Fic family protein ), RVT-UG2, T5orf172 (smart00974), KAP_NTPase (pfam07693), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), COG5377 (Phage-related protein, predicted endonuclease )