myRT

myRT report for GCA_002433505.1_ASM243350v1

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Seq: DJIG01000236.1 TPA_asm: Zunongwangia profunda isolate UBA6600 UBA6600_contig_38518, whole genome shotgun sequence (34438 bp)
Overview 1 RT 1: 27597-32685 bp Neighborhood of RT #1 [27597, 32714] 2A0601 DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII GIIM LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 TnpB_IS66 Feature: gene Location: 27597-28694 bp Feature: domain Description: 2A0601 Location: 27627-28689 bp Feature: domain Description: 2A0601 Location: 27627-28689 bp Feature: gene Location: 28937-29710 bp Feature: domain Description: DDE_Tnp_IS66 Location: 28949-29552 bp Feature: domain Description: DDE_Tnp_IS66 Location: 28949-29552 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 29582-29681 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 29582-29681 bp Feature: gene Location: 29816-31054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30029-30683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30029-30683 bp Feature: domain Description: GIIM Note: maturase Location: 30761-30980 bp Feature: domain Description: GIIM Note: maturase Location: 30761 -30980 bp Feature: gene Location: 31566-32351 bp Feature: domain Description: LZ_Tnp_IS66 Location: 31710-31932 bp Feature: domain Description: LZ_Tnp_IS66 Location: 31 71 0-31 932 bp Feature: domain Description: zf-IS66 Location: 31962-32052 bp Feature: domain Description: zf-IS66 Location: 31 962-32052 bp Feature: domain Description: DDE_Tnp_IS66 Location: 32109-32334 bp Feature: domain Description: DDE_Tnp_IS66 Location: 321 09-32334 bp Feature: gene Location: 32427-32714 bp Feature: domain Description: TnpB_IS66 Location: 32430-32685 bp Feature: domain Description: TnpB_IS66 Location: 32430-32685 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 2A0601 (TIGR00914), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-GII, GIIM (pfam08388), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), TnpB_IS66 (pfam05717)