myRT

myRT report for GCA_002435755.1_ASM243575v1

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Seq: DIYH01000027.1 TPA_asm: Flammeovirgaceae bacterium UBA6059 UBA6059_contig_138, whole genome shotgun sequence (245282 bp)
Overview 1 RT 1: 1831-6680 bp Neighborhood of RT #1 [1831, 6680] DUF4442 AcrR RVT-UG7 OMP_b-brl Feature: gene Location: 1831-2328 bp Feature: domain Description: DUF4442 Location: 1861-2272 bp Feature: domain Description: DUF4442 Location: 1 861 -2272 bp Feature: gene Location: 2325-2921 bp Feature: domain Description: AcrR Location: 2340-2895 bp Feature: domain Description: AcrR Location: 2340-2895 bp Feature: gene Location: 3137-4741 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 3593-3989 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 3593-3989 bp Feature: gene Location: 4994-5641 bp Feature: domain Description: OMP_b-brl Location: 5012-5558 bp Feature: domain Description: OMP_b-brl Location: 501 2-5558 bp Feature: gene Location: 5871-6680 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4442 (pfam14539), AcrR (COG1309), RVT-UG7, OMP_b-brl (pfam13505)

Seq: DIYH01000017.1 TPA_asm: Flammeovirgaceae bacterium UBA6059 UBA6059_contig_595, whole genome shotgun sequence (333738 bp)
Overview 1 RT 1: 155153-160276 bp Neighborhood of RT #1 [155153, 160276] Cmr6_III-B Cas6b_N Cas6b_N Cas6b_C RVT-Retrons Cas1_I-II-III Feature: gene Location: 155153-156454 bp Feature: domain Description: Cmr6_III-B Location: 155426-156152 bp Feature: domain Description: Cmr6_III-B Location: 15542 6-156152 bp Feature: gene Location: 156451-157224 bp Feature: domain Description: Cas6b_N Location: 156466-156619 bp Feature: domain Description: Cas6b_N Location: 156466-156619 bp Feature: domain Description: Cas6b_N Location: 156676-156841 bp Feature: domain Description: Cas6b_N Location: 156676-156841 bp Feature: domain Description: Cas6b_C Location: 156871-157198 bp Feature: domain Description: Cas6b_C Location: 156871-157198 bp Feature: gene Location: 157224-158261 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 157368-157932 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 157368-157932 bp Feature: gene Location: 158261-159247 bp Feature: domain Description: Cas1_I-II-III Location: 158264-159224 bp Feature: domain Description: Cas1_I-II-III Location: 1582 64-1592 2 4 bp Feature: gene Location: 160013-160276 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cmr6_III-B (cd09661), Cas6b_N (pfam17955), Cas6b_C, RVT-Retrons, Cas1_I-II-III (cl00656)