myRT

myRT report for GCA_002436025.1_ASM243602v1

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Seq: DIXM01000001.1 TPA_asm: candidate division Hyd24-12 bacterium UBA6080 UBA6080_contig_168, whole genome shotgun sequence (288371 bp)
Overview 1 RT 1: 1-5174 bp Neighborhood of RT #1 [1, 5230] RVT-GII GIIM HTH_Tnp_1 rve_3 Feature: gene Location: 1-462 bp Feature: gene Location: 600-1169 bp Feature: gene Location: 1181-3337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1952-2570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 952-2570 bp Feature: domain Description: GIIM Note: maturase Location: 2621-2861 bp Feature: domain Description: GIIM Note: maturase Location: 2621 -2861 bp Feature: gene Location: 4384-4641 bp Feature: domain Description: HTH_Tnp_1 Location: 4390-4594 bp Feature: domain Description: HTH_Tnp_1 Location: 4390-4594 bp Feature: gene Location: 4757-5230 bp Feature: domain Description: rve_3 Location: 4976-5174 bp Feature: domain Description: rve_3 Location: 4976-51 74 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HTH_Tnp_1 (pfam01527), rve_3 (pfam13683)

Seq: DIXM01000012.1 TPA_asm: candidate division Hyd24-12 bacterium UBA6080 UBA6080_contig_392, whole genome shotgun sequence (205036 bp)
Overview 1 RT 1: 178832-187018 bp Neighborhood of RT #1 [178832, 187018] XerC RVT-UG9 PRK14975 Feature: gene Location: 178832-180241 bp Feature: gene Location: 181546-181815 bp Feature: domain Description: XerC Location: 181579-181792 bp Feature: domain Description: XerC Location: 181579-181792 bp Feature: gene Location: 182536-184182 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 182749-183385 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 182 749-183385 bp Feature: gene Location: 184175-185779 bp Feature: domain Description: PRK14975 Location: 185000-185753 bp Feature: domain Description: PRK14975 Location: 185000-185753 bp Feature: gene Location: 185825-187018 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XerC (COG4973), RVT-UG9, PRK14975 (bifunctional 3'-5' exonuclease/DNA polymerase; Provisional)